Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01945 ATGGAAGAAGCCCTTGCGAAGTTGGAGCAAGTCCAAACCCTCCTCTTCCAACGCATATCGAATCTAGAACATTCTTATCTTCCAACTGATTCGCCCGTTGTTAACGACCCTATCACTCACACTGATAACGACACTGTGGCTCGCCTCTCTTCCATTTTGCGCACAAACGCCGTTAACGACTTCTCCTTCAAGAGGGTCCCTCCCGATTACTACGATTGGCCTCTCGAAGCCCGCCGTGACGTCCTTGCCGCATACTCCGTTGACCATCTCTGCAAAAGCATCGTTCTGGTTAACACGCAAGCCCCCTCCAATGTCGTTGATTGCAGTGATCCCAAAAATTCAAAGTACTATGTTGTTGTCGTTCAGTACACTGCTCGGTTCAATGCTGAGGCTGTGAAAAATTTTCTGTATTCGCTCAACAATGGAAGTATAGCGAAGAAGAAATTTAATTTGAGGCTAGCTCCTGAGGAGATATCAACAGAATTAACTGGATATGGGCACAACGCCGTGACTTGTATTGGCATGAAAACAGATATTCCGGTAAGGACTGGACCTGTGGATTAG 564 0.4681 MEEALAKLEQVQTLLFQRISNLEHSYLPTDSPVVNDPITHTDNDTVARLSSILRTNAVNDFSFKRVPPDYYDWPLEARRDVLAAYSVDHLCKSIVLVNTQAPSNVVDCSDPKNSKYYVVVVQYTARFNAEAVKNFLYSLNNGSIAKKKFNLRLAPEEISTELTGYGHNAVTCIGMKTDIPVRTGPVD. 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01945 187 CDD YbaK_like 86 181 - -
Seca12g01945 187 Gene3D - 74 182 IPR036754 GO:0002161
Seca12g01945 187 PANTHER UNCHARACTERIZED 35 181 - -
Seca12g01945 187 SUPERFAMILY YbaK/ProRS associated domain 60 181 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01945 Seca-Chr12 23355837 23358545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01945 - - gmx:100815424 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01945 12 23355837 23358545 Seca12g01945 12 23355837 23358545 ECH