Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01932 ATGGCATCCAAAGCTACTTCCTCCCTTGCTCTTTTCCTCACACTCAACCTCCTCTTCTTTTCACTTGTCACTGCTTGTGGTAATTACAATTGCCCTAGTCCAAACCCAAAGCCAAAGCCCAACCCCAAGCCTAAGCCAACCCCAACCCCAAACCCCTACCCAAACCCAAGCCCTTCAAGTGGCACATGCCCTCGTGATGCACTCAAACTTGGTGTGTGCGCCAATGTGCTAAATGGGTTGTTGAATGTGACTTTGGGTCAACCACCAGTGACTCCATGCTGCTCCCTCCTTCAAGGCCTTGCTGACCTTGAGGCTGCAGTGTGCCTATGCACTGCACTCAAAGCAAACGTTTTGGGAATCAATCTCAACCTTCCAATCTCACTCAGCTTGCTTCTCAATGTTTGCTCAAGGAAAGTCCCACGTGATTTCCAATGTGCCTGA 441 0.4989 MASKATSSLALFLTLNLLFFSLVTACGNYNCPSPNPKPKPNPKPKPTPTPNPYPNPSPSSGTCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLQGLADLEAAVCLCTALKANVLGINLNLPISLSLLLNVCSRKVPRDFQCA. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01932 146 PANTHER - 6 145 - -
Seca12g01932 146 CDD HPS_like 61 145 IPR027923 -
Seca12g01932 146 MobiDBLite consensus disorder prediction 34 62 - -
Seca12g01932 146 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Seca12g01932 146 SMART aai_6 63 145 IPR016140 -
Seca12g01932 146 Pfam Hydrophobic seed protein 62 146 IPR027923 -
Seca12g01932 146 MobiDBLite consensus disorder prediction 34 59 - -
Seca12g01932 146 FunFam pEARLI1-like lipid transfer protein 1 61 146 - -
Seca12g01932 146 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 65 145 IPR036312 -
Seca12g01932 146 Gene3D - 61 146 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01932 Seca-Chr12 23180395 23180835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01932 54 145 Acyl Lipid Metabolism Gene Families AT4G22490 41.489 6.32e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01932 - - gmx:100801985 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01932 12 23180395 23180835 Seca12g01932 12 23180395 23180835 ECH