Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01929 ATGAATCCTTCAAGATCTTCAACTCTTGCTCTGTTTTTCACCATCAATTTGCTTTTCTCTGTTCTGGCAAGTGGTTGCTACACTTGTACACAGCCAAAGCCAAATCCATTCCCTTTCCCAAACCCAAGTCCTGCCACAAAGGGCTGTCCTAGAGATGCACTCAAGCTTGGAGTATGTGCCAAGTTGCTTAATGGACCAATTGGTGCAGTGGTGGGGTCACCACCAGACCACCCATGTTGCTCTGTGTTAGAAGGACTTCTTGATCTTGAAGTTGCAGTTTGTCTCTGCACTGCCATCAAAGCTAACATTCTTGGCATTAATCTTAACATTCCTATTTCACTTAGCTTGCTCCTTAATGCATGTGAGAAGAACCCACCCTCTGACTTTCAGTGTGCCTAA 399 0.4486 MNPSRSSTLALFFTINLLFSVLASGCYTCTQPKPNPFPFPNPSPATKGCPRDALKLGVCAKLLNGPIGAVVGSPPDHPCCSVLEGLLDLEVAVCLCTAIKANILGINLNIPISLSLLLNACEKNPPSDFQCA. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01929 132 Gene3D - 48 132 IPR036312 -
Seca12g01929 132 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Seca12g01929 132 PANTHER - 6 131 - -
Seca12g01929 132 SMART aai_6 49 131 IPR016140 -
Seca12g01929 132 CDD HPS_like 49 131 IPR027923 -
Seca12g01929 132 Pfam Hydrophobic seed protein 49 132 IPR027923 -
Seca12g01929 132 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 131 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01929 Seca-Chr12 23125262 23125660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01929 40 131 Acyl Lipid Metabolism Gene Families AT4G22490 33.696 1.34e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01929 - - gmx:100527818 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01929 12 23125262 23125660 Seca12g01929 12 23125262 23125660 ECH