Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01928 ATGGCTTCCCAATCCCTTGCTCTTTTCCTCACACTCAACATCCTCTTCTTTTCACTTGTCTCTGCTTGCGGTAGTTATAAATGCCCTGGTAACCCTGGTTCCGGTTCTGGTTCTGGCTCCGGCTCCGGCTCCGGCTCTTCAGGTGGCTCATGCCCTCGTGATGCACTGAAACTTGGCGTGTGTGCTAATGTGCTAAATGGGTTGTTGAATGTGACTTTGGGTCAACCACCAGTGACCCCTTGCTGCTCCCTCCTCAATGGTCTTGTTGACCTTGAGGCTGCAGTGTGCCTCTGCACTGCACTTAAAGCAAATATTTTGGGAATCAATCTCAACCTTCCAATCTCACTCAGCTTGCTTCTCAACGTTTGCTCAAGGCAAGTCCCACGTGATTTCCAATGTGCCTAA 405 0.5012 MASQSLALFLTLNILFFSLVSACGSYKCPGNPGSGSGSGSGSGSGSSGGSCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLNGLVDLEAAVCLCTALKANILGINLNLPISLSLLLNVCSRQVPRDFQCA. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01928 134 FunFam pEARLI1-like lipid transfer protein 1 49 134 - -
Seca12g01928 134 Gene3D - 50 134 IPR036312 -
Seca12g01928 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 133 IPR036312 -
Seca12g01928 134 Pfam Hydrophobic seed protein 51 134 IPR027923 -
Seca12g01928 134 SMART aai_6 51 133 IPR016140 -
Seca12g01928 134 CDD HPS_like 51 133 IPR027923 -
Seca12g01928 134 PANTHER - 3 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01928 Seca-Chr12 23078859 23079263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01928 49 133 Acyl Lipid Metabolism Gene Families AT4G22490 43.529 2.11e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01928 - - gmx:100801985 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01928 12 23078859 23079263 Seca12g01928 12 23078859 23079263 ECH