Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01909 ATGGCTTCTACTAGAGCTCTCTTCCTCTTTCTCATCAACATTTCCTTGCTTCTCGCCTTCTCTTCAGCTGAGGATCCATTCGTTTTCCACAACTTTGAGGTCTCTTACATCACTGCTTCTCCTCTTGGAGTTCCTCAACAGGTCATTGCTATCAACGACAAGTTTCCAGGTCCTACTATCAATGTAACCACAAACAACAACGTTGTTGTCAATGTCCGAAACAAATTGGATGAGAGCCTCCTCATTCATTGGTCTGGGATTCAGCAACGGAGGAGTTCATGGCAAGATGGTGTTCTTGGCACAAATTGTCCCATTCCTCCTAAATGGAACTGGACTTACCAGTTTCAGGTTAAGGATCAGATTGGAAGCTTTTTCTACTTTCCTTCACTTCATTTTCAAAGAGCAGCTGGTGGATTTGGGAGCTTCATCATAAACAATCGCCCTATCATTCCTATTCCTTTTGATACCCCATATGGGGACATTGTCATTTTGATTGGAGATTGGTACACGCGCAATCATTCGGATTTGAGGAAGGATCTGGATGCTGGAAAAGATCTTGGCATGCCAGATGGTGTTCTCATTAATGGGAAAGGACCTTTTAGATATAACGATACACTTGTTCCTGATAACATTGAACATGAAACACTTGAAGTCCATCCGGGAAAAACATACCGACTTCGTGTACATAATGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTCTAGCAGAGAGTGAGGGATCTTATACAGTGCAACAGAACTATACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTAGTAACCATGGATCAGAATGCAAGTACAGATTACTACATTGTAGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAAAGAGTTACTGGAGTTGGTATCTTGCACTATACAAATTCCAAGGGGAAAGCTCGTGGTCCTTTACCACCAGGTCCAGATGATCAATTTGACAAAACTTACTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCAAACCCACAAGGGTCTTTCAGATATGGTTCCATCAATGTGACTGAGATTTATGTATTGAAAAATAAGCCACTAGAGAAAATTGATGGGAAGAGGCGAGCAACACTCAGTGGGATCTCTTTTGTTAATCCTGCCACTCCAATCAGGCTTGCAGATCAGTACAAATTAAAGGGAGTATACAAGCTTGATTTTCCTACGAAGCCTATAACTGGACCACCTCGCGCAGAAACATCAGTAATTAATGGAACTTATAGAGGATTTATGGAAATTATACTGCAGAACAATGACACCAAGATGCATACCTATCACTTGAGTGGATATGCATTTTTTGTAGTAGGGTACTGA 1401 0.4104 MASTRALFLFLINISLLLAFSSAEDPFVFHNFEVSYITASPLGVPQQVIAINDKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLHFQRAAGGFGSFIINNRPIIPIPFDTPYGDIVILIGDWYTRNHSDLRKDLDAGKDLGMPDGVLINGKGPFRYNDTLVPDNIEHETLEVHPGKTYRLRVHNVGISTSLNFRIQNHNLLLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESRWQRVTGVGILHYTNSKGKARGPLPPGPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPLEKIDGKRRATLSGISFVNPATPIRLADQYKLKGVYKLDFPTKPITGPPRAETSVINGTYRGFMEIILQNNDTKMHTYHLSGYAFFVVGY. 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01909 466 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Seca12g01909 466 FunFam Monocopper oxidase-like protein 158 351 - -
Seca12g01909 466 SUPERFAMILY Cupredoxins 378 466 IPR008972 -
Seca12g01909 466 Pfam Multicopper oxidase 403 465 IPR011706 GO:0005507|GO:0016491
Seca12g01909 466 Gene3D - 363 466 IPR008972 -
Seca12g01909 466 PANTHER MULTI-COPPER OXIDASE 46 465 IPR045087 -
Seca12g01909 466 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Seca12g01909 466 Gene3D - 158 351 IPR008972 -
Seca12g01909 466 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Seca12g01909 466 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Seca12g01909 466 Pfam Multicopper oxidase 160 313 IPR001117 -
Seca12g01909 466 Gene3D - 21 146 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01909 Seca-Chr12 22393601 22398691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01909 - - gmx:100788318 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01909 12 22393601 22398691 Seca12g01909 12 22393601 22398691 ECH