Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01772 ATGGGTGTGTGGTGGTGGAGACTGCTTTTTGCTGCTATTGCTGGGATTCTCTTGTCTCCTGAACACTGTGCTTCCCAGAAAGATCCGAAGTATACATTTATGCACAATGCAACTTCCGCACCGAACATCTCATACTACGACTACATCATAATTGGCGGCGGCACAGCAGGGTGTCCTTTAGCTGCGACCCTCTCCCAAAATTACAGCGTGTTGCTGCTTGAACGAGGTGGCTCACCCTATGGCAACACTAACATCACCAACTTAGCCGCATTCGGTGCTTGCCTTTCTGACACCTCTCCTACCTCTCCCTCTCAGCGTTTCATCTCTGAAGACGGCGTCATTAACTCAAGAGCTCGAGTGCTTGGTGGTGGAAGCTGTTTAAACGCTGGCTTCTATACTCGCGCCAGCCCTCAATATGTAAGGGAAGTGGGTTGGGATGGAAGGACAGTGAATGAGTCGTACCAATGGGTGGAAAAGGTGGTGGCTTTTGAGCCACAGGTGAAGCAGTGGCAGTCAGCTGTGCGGGATGGACTGTTGGAGGTAGGAGTGATGCCTAACAATGGCTTCACTTACGATCATATGTATGGTACTAAGGTTGGGGGTACCATCTTTGACAAGAATGGTTACAGGCACACCGCTGCTGATCTTTTGGAATATGCCAACCCCACTGGAATCACTGTGCTTTTGCATGCCACCGTGCATAGGATCTTCTTTAGAATGAAAGGAGTATCAAGGCCATGGGCCCATGGAGTAGTGTTCAGGGATGCATCAGGGCGGAAACATAAAGCGTACCTAAAGCATGGGTCCAAGAACGAGATCATTGTATCAGCTGGAGCACTTGGAAGCCCACAACTTCTAATGTTGAGTGGAGTTGGACCAGCACACCACCTTCGAGCCCATAACATCAGTATAACATTGGACCAGCCATTGGTTGGACAGGGAATGTCAGATAACCCCATGAATGCCATCTTTGTCCCGTCTCCTGTCCCTGTAGAGGTCTCACTCATTGAGGTCGTTGGTATCACCAAGTTTGGCAGCTACATTGAAGCTGCCAGTGGTGAAAACTTTGCTGGTGGTTCCCCAAAAGATTACGGAATGTTCTCCCCCAAGATTGGTCAACTCTCCACGGTTCCCCCAAAGCAGAGGACCCCAGAAGCCCTGACAAAAGCAATAAAATCAATGGAGGCTCTTGACCAAGCAGCATTCCAAGGTGGATTCATCCTAGAGAAAATCATGGGTCCACTTTCAGCGGGTCATTTGGAGCTCCAAACCCGTAATCCAAATGATAACCCGATTGTAACCTTCAAATACTTCCAGGACCCACGAGACTTAGAGAGATGCGTGCAGGGACTTAGCACCGTGGAGAAGATAATTGAGTCCAAGGCTTTCTCTCCATTCAAATACGAGAACATGCCAATTTCTATGCTATTGAACATTACTGCAAGTTCCCCAGTGAATTTGTTGCCTAAACACACAAATAGCTCATTGTCTTTGGAGCAGTTTTGCAGAGACACTGTGATGACCATTTGGCATTACCATGGAGGTTGCCAAGTTGGGAAAGTTGTTGATAGGGACTATAAGGTTCTTGGTGTGGACGCACTGCGTGTAATTGATGGTTCCACCTTTAATTATTCTCCTGGAACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGGTATATGGGAGTCAAAATATTGAGAGAGAGACTTGTTGCTGCTGTTGATGAATCAGATTGA 1737 0.4778 MGVWWWRLLFAAIAGILLSPEHCASQKDPKYTFMHNATSAPNISYYDYIIIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNTNITNLAAFGACLSDTSPTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYVREVGWDGRTVNESYQWVEKVVAFEPQVKQWQSAVRDGLLEVGVMPNNGFTYDHMYGTKVGGTIFDKNGYRHTAADLLEYANPTGITVLLHATVHRIFFRMKGVSRPWAHGVVFRDASGRKHKAYLKHGSKNEIIVSAGALGSPQLLMLSGVGPAHHLRAHNISITLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIEVVGITKFGSYIEAASGENFAGGSPKDYGMFSPKIGQLSTVPPKQRTPEALTKAIKSMEALDQAAFQGGFILEKIMGPLSAGHLELQTRNPNDNPIVTFKYFQDPRDLERCVQGLSTVEKIIESKAFSPFKYENMPISMLLNITASSPVNLLPKHTNSSLSLEQFCRDTVMTIWHYHGGCQVGKVVDRDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILRERLVAAVDESD. 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01772 578 Gene3D - 46 558 IPR036188 -
Seca12g01772 578 PANTHER OSJNBA0019K04.7 PROTEIN 17 570 - -
Seca12g01772 578 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Seca12g01772 578 Gene3D - 163 508 - -
Seca12g01772 578 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Seca12g01772 578 SUPERFAMILY FAD/NAD(P)-binding domain 45 568 IPR036188 -
Seca12g01772 578 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Seca12g01772 578 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Seca12g01772 578 PIRSF Alcohol_oxidase 22 577 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01772 Seca-Chr12 19987689 19995305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01772 3 571 Miscellaneous Gene Families AT5G51950 59.028 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01772 - - gmx:100796752 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01772 12 19987689 19995305 Seca12g01772 12 19987689 19995305 ECH