Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01736 ATGGCGGATCCGATCCCGGCGCCACCCAGATCCGCCACGGACCTCTTCTCGGATCCACTTGACGCCCACCCGCTATGGTTCAAACCCGCATCGTTCCTCTCCCCGGACTTCGATTCCGAATCCTACATTTCGGAGCTCCGAACCTTTGTCCCCTTCGACACTCTCCGTTCGGAGCTCAACAACTACCTCTCCTCCCTCAACCACGAACTCATCGATCTCATCAACCGTGACTACGCCGATTTCGTTAACCTCAGCACCAAGCTCGTCGATGTCGATGCCGCAGTGGTGCGGATGCGTGCCCCACTCGTGGAGCTCCGGGAGAAGATCGAGCAGTTCAGAGGATCCGTCGAAGTTTCGCTTGTCGCCATAAAGAATGGTTTGAAGCAAAGATCTGAAGCAGCATCTGCGAGGGAGACTTTGGAGCTTCTCCTCGACACGTTTCACGTTGTTTCCAAGGTTGAGAAACTAATAAAGGAGCTGCCTAGTGTGCCCTCCGACTGGTCAAATGGAGATGTAAGTTTGTCAGAGAGAAATTCATTGAGCAATGGGGTTTCTGTGCAGCATGTTGAGAATGGGACAAGTATCAGAGAGACTCAAAGCATGCTTCTGGAGAGAATTGCCAGTGAGATGAACAGGCTAAAGTTCTATGTTACACATGCAAAGAACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTAATAGTAGATGCAAGCTTAGGACATTGCTTTGTAGATGGTCTAGAGCACCGGGATGCAACTGCAATTTACAATTGCTTACGTGCATATGCTGCTATTGATAACACCAAAAATGCAGAAGAAATTTTTCGAATTACTGTTGTGGCTCCATTGATACAGAAGATCATCCCACATGGGTCATCAGCTGTGGTTGCTGGATCATCTGGGGATGGGCTTGAAAATGATTATCAATCAATTAAGGAGTGCATTGCTAGGGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTACATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAAGAGGTTCTCTCTGCTATTCAGAAGGGAAAACCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGAGTTCTTGGCTTATCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACTGAGTTCATGAAGCAATGGAATATTGGAGTTTATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCTCTAGATTCTGTGCTAACAACCTCCAGTCTTGTCCCTGTTCAAAATTCAGACCTCAGCAAAGCAAACTATCAAGATTTAACATTGAAACAAAGTCTTACTCTGTTGGAGAGTTTGAGATCCTGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGATAAGTTCCTTCGCCTATCCTTGCAGCTTCTTTCTAGATACTCAAATTGGCTGTCATCTGGACTGACGGCACGCAAGAACCGTAACACAAGCACCAGCACTGGGTGTGAATGGGCTGTTTCGGCTGCCGTAGATGACTTTATTTTTGTATGCATCATGCCTTCACTTTATTTTTTTGTACATCATATGTTCATCTAA 1638 0.4469 MADPIPAPPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVEVSLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVSLSERNSLSNGVSVQHVENGTSIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLIVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEEIFRITVVAPLIQKIIPHGSSAVVAGSSGDGLENDYQSIKECIARDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLEFLAYLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDLSKANYQDLTLKQSLTLLESLRSCWREDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLTARKNRNTSTSTGCEWAVSAAVDDFIFVCIMPSLYFFVHHMFI. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01736 545 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 10 531 IPR009316 GO:0007030|GO:0015031|GO:0016020
Seca12g01736 545 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01736 Seca-Chr12 19122333 19129137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01736 K20289 - gmx:100817096 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01736 12 19122333 19129137 Seca12g01736 12 19122333 19129137 ECH