Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01689 ATGTTGCCTCCTATCGATCTCAACGATATCAAAGAGAAACTCTCCTTTCAGTTGCGCCCTTGGCAACGCTCCTTCCAGTTCTGGGTGCGAGCCATTGATATCTACACTGGATACAAGGTGTTTCAGCTGAAAGTGAATTTCGAGAAGGATGTGCAGAAACAGGAAGCAATGTGGGAAAAACAGCACGAGCTTGCTGCTGATAAGATTTTCTCCATGTGCTCCGACCTTGGAGGTTTCTTCCTCAAGATTGCCCAAATTATAGGGAAGCCTGACTTGGCCCCGGCTGCATGGGTGAGAAGGCTTGTTACTCTGTGTGATCAGGCTCCTGCAACCCCATTTCACACTGTGAAACTTGTGCTGGAGAATGAGCTGGAACTGGCTATTGATGATGTGTTTGAGAGGTTCGATATGGAGCCACTTGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATAAAGGTGATGTTGTTGTCAAGGTTCAACATCCTGGAGTTCAGGATCTGATGATGACAGATATCCATAACTTGCAAGCTTTTGCTTTGTACATGCAAAAGACAGATATCAAATTTGATCTATATTCGGTGACAAAGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCATGAGGGAGGCTGATGCAATGGAAAGGATTAGAAAGTTCTTGTATGGAAATAACAAAAGGACTCCTGTTTTGGTGCCAAGAGTAATACGAGATATGGTTACTAGGTATTCAGCACAGCATCTTACAAGAGTCCTAGTTATGGAATATATTGATGGGGTTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGAGGCATAAATCCTCGTGGTAAGGTTGCGGCTGTAGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGACAAATGATTTTGAAAAGTGGATTCTTCCACGCTGATCCTCACCCAGGAAATATCCTGATTTGTAAAGGATCAGATGTTGCCTTGCTAGACTATGGGCAGGTGAAGGATCTCCCGGAAGAGTTGAGGCTTGGTTATGCTAATCTAGTTCTTGCTATTGCTGATGGTGACCCATTAAGAGCTTCAGAGAGCTATAGGGAGCTTGGTATAAAAACCTTAAGCAAATGTGAAAATGAGCAACAAGAAATGTTTAAACTGGCACAGACAATGTTTGATACAAAATTGCCTCCAGGGGTGGTAATGCTGCAACCCTTCTCAGAGGAATCTTCAATTAAAAAAATTGCTGTTCAGTCTTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGACCCATTGCTGAAGAAGCTTTGTTTCAAGCTGGCAGACTTAGAGGCAAGGATATTAAGCCCAAGGGTAGAAAACGCGGCTTAGGAAAAATATTATTTTGGAGAGACTAA 1467 0.4247 MLPPIDLNDIKEKLSFQLRPWQRSFQFWVRAIDIYTGYKVFQLKVNFEKDVQKQEAMWEKQHELAADKIFSMCSDLGGFFLKIAQIIGKPDLAPAAWVRRLVTLCDQAPATPFHTVKLVLENELELAIDDVFERFDMEPLGSASIAQVHRARLKGDKGDVVVKVQHPGVQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFMREADAMERIRKFLYGNNKRTPVLVPRVIRDMVTRYSAQHLTRVLVMEYIDGVPIMNLGDEIAKRGINPRGKVAAVAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSDVALLDYGQVKDLPEELRLGYANLVLAIADGDPLRASESYRELGIKTLSKCENEQQEMFKLAQTMFDTKLPPGVVMLQPFSEESSIKKIAVQSFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEALFQAGRLRGKDIKPKGRKRGLGKILFWRD. 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01689 488 Pfam ABC1 atypical kinase-like domain 104 362 IPR004147 -
Seca12g01689 488 ProSiteProfiles Protein kinase domain profile. 134 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g01689 488 PANTHER ABC1 FAMILY PROTEIN 19 461 - -
Seca12g01689 488 CDD ABC1_ADCK3-like 104 366 - -
Seca12g01689 488 Gene3D Transferase(Phosphotransferase) domain 1 125 350 - -
Seca12g01689 488 SUPERFAMILY Protein kinase-like (PK-like) 108 338 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01689 Seca-Chr12 18371450 18379859 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01689 K08869 - gmx:100813009 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01689 12 18371450 18379859 Seca12g01689 12 18371450 18379859 ECH