Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01678 ATGTTGCGCGGGTACCAAATGCTTGATTCAACACCCTCTTTTCAAGACTCCCTCAAGGCACTTGAGGCTGACATTCGACATGCCAATCTGCTGGCTGCTTCTATTCCAAGGGGCAAGGGCAGGGCTTGCCTTCAAATGAAGTTAGTTTATAATAAATTGGCACCGGTTTTTCTGTTTTTATTTCAATGGATGGATTGCTCATGTTCATGCCTACTTTCAAGTCATTTGAATCTTTTCCGTGTAATTGTATACAAGGCGCATACTAATGGGAAGCCAAATATATTTTCTTGCGGAAGGAAAGCAACCATAAGGGAGTTCTATAGTGTTATATTACCTTCTCTCCAGCGCCTTCACGGTGATTTAGTAGATGCTGACATTACTCAAGAAAAAGATCACAGCATGGAGATGGTTTTAAATAGAAGTGAGGAGGATAAGAGGAACCCTTCTGATTTGGACTCAGATAGAGAAAATGAGTGTGGAATCTGCTTAGAGTCCTGCACCAAAATAGTTTTGCCTAATTGCTGCCATGCAATGTGTATAAATTGTTACAATGACTGCTTTTATTCACTTTATGCAACAGGAACACAAGGTCAGAATCTTGTCCATTTTGCCGGGGAAGTTTAA 624 0.4071 MLRGYQMLDSTPSFQDSLKALEADIRHANLLAASIPRGKGRACLQMKLVYNKLAPVFLFLFQWMDCSCSCLLSSHLNLFRVIVYKAHTNGKPNIFSCGRKATIREFYSVILPSLQRLHGDLVDADITQEKDHSMEMVLNRSEEDKRNPSDLDSDRENECGICLESCTKIVLPNCCHAMCINCYNDCFYSLYATGTQGQNLVHFAGEV. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01678 207 SUPERFAMILY RING/U-box 158 188 - -
Seca12g01678 207 MobiDBLite consensus disorder prediction 136 156 - -
Seca12g01678 207 ProSitePatterns Zinc finger RING-type signature. 174 183 IPR017907 -
Seca12g01678 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 195 IPR013083 -
Seca12g01678 207 PANTHER RING FINGER PROTEIN 41, 151 13 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01678 Seca-Chr12 18311110 18313706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01678 - - pcin:129320010 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01678 12 18311110 18313706 Seca12g01678 12 18311110 18313706 ECH