Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01640 ATGGCAGCAAAAAGGCTTGTGGTAGCTTCACTTTTCCTTTGCTGTTTAGCTGGAACTTGTTATGGGGATATTCTCTTCTCTTCCTTGAAAAGAACTCTTGATGTCACAGCTTTCCCCAAGCATGGACAAGTTCTGAAAGCTGGAATAGATAACATCACTGTGACATGGGCTCTGAACAAGACCCTCCCAGCTGGGACAGACTCTTCCTACAAAACCATTAAGCTGAAGCTGTGCTACGCGCCCATCAGCCAAAAAGACCGCGCTTGGAGAAAGACTGAGGACCACCTCGCCAGGGACAAGACTTGCCAGCACAAGATCGTAGCCAAACCCTACGATGCTTCTAACAAATCGGTGCATAGCTTCCAGTGGTTGATTGAGCGAGACGTGCCTGAAGCCACGTACTTTGTACGCGCCTACGCTCTTGATTCCAATGAAGCCGAAGTGGGTTACGGTCAAACCACGGATGCTCATAAGACCACCAACCTGTTTGAGATCCATGCAATCAGTGGCCGCCACGCGTCACTTGATATTTGTTCCATTTGCTTCAGTGCTTTCTCGGTGGTGTCTCTGTTTTTCTTCTTCTATATTGAGAAGAGAAAGGGGAAGGCTTCATCACAGAAGTGA 624 0.4808 MAAKRLVVASLFLCCLAGTCYGDILFSSLKRTLDVTAFPKHGQVLKAGIDNITVTWALNKTLPAGTDSSYKTIKLKLCYAPISQKDRAWRKTEDHLARDKTCQHKIVAKPYDASNKSVHSFQWLIERDVPEATYFVRAYALDSNEAEVGYGQTTDAHKTTNLFEIHAISGRHASLDICSICFSAFSVVSLFFFFYIEKRKGKASSQK. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01640 207 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 1 206 IPR016605 GO:0010167|GO:0015706
Seca12g01640 207 PIRSF NAR2 1 205 IPR016605 GO:0010167|GO:0015706
Seca12g01640 207 Pfam High-affinity nitrate transporter accessory, Ig-like domain 26 170 IPR016605 GO:0010167|GO:0015706
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01640 Seca-Chr12 17710936 17712551 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01640 K26563 - gmx:100794996 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01640 12 17710936 17712551 Seca12g01640 12 17710936 17712551 ECH