Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01606 ATGTGGACGGTGCTTTCTTCCCCCCAAACGCAAACATTGATTCACAATTCAATTACAACATCAACAGGGTTTCACCTCCAATTCCAACCCACCCCAACAACAAGAAACAGAATCTCCTTCCCTCTCAAAACCTCCTCATCATCAGCACCAAAATGCCAGCTACAGGAAAGTAGTAGCCACTCCTCTTCTCTCCAACCAAGAACCACCCAAGACGATAGCATTCCCATTGAAGACGTGAAGATCCTAGCCAAGTTCAAGTCAAGGCACAACTACATCCGTGTTCTAGAAGTTTCTAGAAAAGCCGACCACCCATTCCGCGGTTCCAGACTCCTCCTCCTCGACGGCCCCGGAAACATCCACAGCATTTCTTTCCTCTTCAAATCCCTCACCAACACTTACTTCGACGTCTTCGCCACGCTCCCTCCCATCATCCCCCCTGGACCCCTCGCCATCCTCGGCTTCGGCGCCGGCTCCGCCGCTTGCATCATCCTCGAGCTCTACCCCGACGCTGTCATCCACGGCTGGGAGCTCGATCCCTCCGTGATTCAAGTTGCAAGAGAGTATTTCAACCTTGCCAAACTCGAGAGGGAACACCGACGGAGGCTTTTTCTCTACGTTGGAAATGCCTTGATGGCGAATACGGAGGAGGGTTTCTCTGGGATTTTTGTGGATTTGTTCTCCAAGGGGAGTTTGATACCTGAGCTTCAGGAACCTGCCACGTGGCAGAGGCTGAAGGCGTGTTTGAAGAAAGGAGGGAGGATAATGGTGAATGTTGGGGGAAGTTGTGTGGAGGCAGAGAATAAGATGAGAGATGGGAAGGTTGTGATGGAAGAGACTCTGAAGGCTATGAGAGTGGTTTTTGGAGAGAAGCTTTTTGTTCTCACATTGGGGAATCGTAAGGATGATAGTTCTCTTGCTCTCACTGGGGATTTGCCTCAACTTGATACATGGAAGAACGCTCTTCTTCCTTCATTGAGATATTACGTCGATTTCTGGACTCCCTATTCTGATTAG 1014 0.499 MWTVLSSPQTQTLIHNSITTSTGFHLQFQPTPTTRNRISFPLKTSSSSAPKCQLQESSSHSSSLQPRTTQDDSIPIEDVKILAKFKSRHNYIRVLEVSRKADHPFRGSRLLLLDGPGNIHSISFLFKSLTNTYFDVFATLPPIIPPGPLAILGFGAGSAACIILELYPDAVIHGWELDPSVIQVAREYFNLAKLEREHRRRLFLYVGNALMANTEEGFSGIFVDLFSKGSLIPELQEPATWQRLKACLKKGGRIMVNVGGSCVEAENKMRDGKVVMEETLKAMRVVFGEKLFVLTLGNRKDDSSLALTGDLPQLDTWKNALLPSLRYYVDFWTPYSD. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01606 337 CDD AdoMet_MTases 152 256 - -
Seca12g01606 337 Gene3D Vaccinia Virus protein VP39 86 315 IPR029063 -
Seca12g01606 337 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 79 260 - -
Seca12g01606 337 MobiDBLite consensus disorder prediction 37 71 - -
Seca12g01606 337 FunFam S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 89 327 - -
Seca12g01606 337 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 265 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01606 Seca-Chr12 17358763 17359776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01606 - - aprc:113847774 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01606 12 17358763 17359776 Seca12g01606 12 17358763 17359776 ECH