Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01596 ATGATGGAGTCCCCAACCTCAATCTGCGACACTGAGATCTCTCTTCAAATTCAGAACATTGATGCTTTTGCTGCTTCTTTTGCCAAATCCCTCCAATCCCTGAGGACAACAGCACAACAAACTGCTCGATATCAAGTTCAACTAGAAGAGGTTAAAGGCAAACTAAGGGAGGCAGAGGATGATTTGGTCAAAGCACTCGCAGTTAAGACCCGCAAAGAGGCCAAGCGTATGGCTTTGTTGGATGCAATTGCCTTTGCAAAGGCTAGGGTTGAAGAGCTCAACACAAGCATTCAGGAGCACCGAAGCAAAAAAGAAGAAATTACGGAATTTCTATCGCAACAGTCTCTCGCTTTGGCAGCCTCTGAAGGGAAGTTAAATGAAAGCATTGAAAATACAGATGAAACACAGGAGGCCATCTCTTGGTACAACAGGGTCCTTGGTTTTCATGTCAAAGGGGGACGTGGGGTAAAATTCACGTTCAAGAATATAAATTTGAATAATCCAGATGAGGAGTATTTTTTCACTATCTGCCATGAAAGCAATACTTACACATTGTTAAGTTGTGAACCTTCCCCCAGTGATATCAAAGAGTTGATCAATGAATTAAACAAGACAAATGGTCTGTTTAAATTTGTCAAAGTAATGAGGAAAAGGTTCCAACAAGCTGCGGCACAAGGGAGTTCAGTTCCAACAACTATTGGACATGAAGAATCTGCCTTTGTCTCTGCATCTGCTCCAGTTTTATCAATGTCATCTGTTAGAAGTGATTCTACAACGATGGAAAATGAGCATCGAGTTGAACCCACAGAGGATAATACACAATTCAAGAAACAAAATGTTCGCAGAAGGATAAATTCAGCACTTTTATCTCCTGGATCTGCATCATCTGTTCGCCAGTCTCCTTGTTTGAAGGCTTGGAAATAA 924 0.4145 MMESPTSICDTEISLQIQNIDAFAASFAKSLQSLRTTAQQTARYQVQLEEVKGKLREAEDDLVKALAVKTRKEAKRMALLDAIAFAKARVEELNTSIQEHRSKKEEITEFLSQQSLALAASEGKLNESIENTDETQEAISWYNRVLGFHVKGGRGVKFTFKNINLNNPDEEYFFTICHESNTYTLLSCEPSPSDIKELINELNKTNGLFKFVKVMRKRFQQAAAQGSSVPTTIGHEESAFVSASAPVLSMSSVRSDSTTMENEHRVEPTEDNTQFKKQNVRRRINSALLSPGSASSVRQSPCLKAWK. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01596 307 Coils Coil 83 103 - -
Seca12g01596 307 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 282 IPR045143 GO:0007059|GO:0031262
Seca12g01596 307 MobiDBLite consensus disorder prediction 251 275 - -
Seca12g01596 307 Pfam Chromosome segregation protein Spc25 152 220 IPR013255 GO:0007059|GO:0031262
Seca12g01596 307 Gene3D Chromosome segregation protein Spc25 128 227 - -
Seca12g01596 307 Coils Coil 41 75 - -
Seca12g01596 307 MobiDBLite consensus disorder prediction 258 275 - -
Seca12g01596 307 FunFam Probable kinetochore protein spc25 127 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01596 Seca-Chr12 17220445 17225383 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01596 K11550 - gmx:100776032 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01596 12 17220445 17225383 Seca12g01596 12 17220445 17225383 ECH