Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01587 ATGCTTGAAAACTTTGCATGCTTATTACTTTTCCTTCTACTCTATAAGAAATGGCGTCAAGATTTTGAGGTGTCTAAATTGACTGAAGAATCCGTTAAAGATGCTGCTCAAACTGGAAAAGCATATGTACATGACTTTCTAGATATCAATGGCAGACCTGTGCTTGTGGTGGCCGCATCCAAGCATTTTCCTCAAGCACAGGATCCTGCAGATGATGAGAGGCTATGTGTTTTCTTAATTGAAAAGGCATTAACTAAGCTTCCAACTGGGAAAGAACAGATACTTGGTATAGTTGATCTCAGAGGTTTTGGTACAGAAAATGCAGATCTTAAATTCTTGACATTCTTGTTTGATGTTTTCTATTATTACTATCCCAAGCGATTGGCTGAAGTACTATTTGTGGATGCTCCTTTTGTGTTTAAGCCAATTTGGCAGATGGTCAAGCCCTTGTTAAAATCGTATGCTTCTTTGGTAAGCGTTACGATTTTCAATGTAAGATTTTGTTCTGCAGAGACTGTCAGGAAGGAATATTTTACAACTGAAACTTTGCCACCAAGCTTCAGAGATTGA 570 0.3807 MLENFACLLLFLLLYKKWRQDFEVSKLTEESVKDAAQTGKAYVHDFLDINGRPVLVVAASKHFPQAQDPADDERLCVFLIEKALTKLPTGKEQILGIVDLRGFGTENADLKFLTFLFDVFYYYYPKRLAEVLFVDAPFVFKPIWQMVKPLLKSYASLVSVTIFNVRFCSAETVRKEYFTTETLPPSFRD. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01587 189 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 31 189 IPR001251 -
Seca12g01587 189 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 17 189 - -
Seca12g01587 189 SMART sec14_4 35 182 IPR001251 -
Seca12g01587 189 CDD SEC14 33 153 IPR001251 -
Seca12g01587 189 SUPERFAMILY CRAL/TRIO domain 30 153 IPR036865 -
Seca12g01587 189 Gene3D - 12 185 IPR036865 -
Seca12g01587 189 Pfam CRAL/TRIO domain 37 153 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01587 Seca-Chr12 17121357 17123992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01587 - - gmx:100816130 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01587 12 17121357 17123992 Seca12g01587 12 17121357 17123992 ECH