Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01583 ATGACTTCAAGCATGTTGAGTGGGGAGCGAAGATGGGCCTCTTCCAGAAGAGGTGGTATGACTGTTTTAGGAAAAGTTGCAGTTCCAAAACCTATCAACTTACCCAGTCAGAGGTTAGAAAATCACGGTCTTGACCCAAATGTGGAGATTGTTCCCAAGGGTACACTCAGCTGGGGCAGTAGATCGTCTTCTTCTGCATCAAATGCATGGGGGTCGTCTTCTCTGTCCCCAAATGCTGACGGTGGCACTAGTTCGCCCAGCCACCTCAGTGCCCGTCCATCATCTGGAGGAAGTGGAACACGACCTTCTACTGCTGGTAGTGATAGGGCTCTTGAGCCTACCACTAATGCGTGGGGGTCAAATTCTCGGCCTTCATCAGCATCTGGGGCACTGCCAACAAATCAGTCTTCACTGACATCATTGCGGCCTCGCAGTGCAGAAACAAGACCTGGTAGCTCACAGCTGTCTCGATTTGCTGAACCCTTAACTGAAAGTTCTGGTGCTTGGAGTGCTGCTAGGACTACAGAAAAACTGGGAGTTACACAACCCAAGAATGATGAATTTTCTCTGAGCTCTGGAGATTTCCCCACCCTTGGTTCTGAAAAGGACAAGTCTGCCCTGAATTCTGAGTTGCAAGACCATATTTCTCATGCTCGCCCTGGCTCATCTTCTGGACTCAGGAAAGAGATCAATGAGACCTCTGTTGGTGATGATGTTCCTGTAAATGCAAATATTAAAGGTGGAGCTGTAGATTCTTGGAGAAGAGATTATCAGGCTTATAATGAGGATGGTGTGAGGCCTAGCTTAGAGAAATGGCATGGAAATTCCCAGCCTTACCGTAATGCTGGTTTTCCTCCTCAACACTATGATGCTTGGCATGGTCCTCCAGTAAATAACCCTCAAAGCTGTGTTTGGTTCAGGGGTCCTCCTAGTGGTCCTCCATTTGGAAATCCTGTTCCTCCAAGTGGCTTTCCAATCGAACCATTTCCATACTATCGCCCACATATTCCCCCTACCGGGCTTGCCAACCCACCACTGGTTCCCCCTCCTGGGACTGCACCAAGAGGGCACCATAAGAATGGAGATGTCTACAGGCCTCATATGCCTGATGCTTATATTCGCCCAGGCATTCCTATCAGACCTGGCTTTTATCCTGGTTCGATGGCCTATGAGGGATATTACAATCCTCCAATGGGCTACTGCAATTCAAATGAACGAGATGCTCCTTTCATGGGAATGGCCTCTGGACCCCCTGTTTTTAATAGGTACTCAAATCAAAATCCCCCTGAACCTGGCAATTCACAAGGTAGATCTGGTGCATATGGTAATGCTGAGAAGCATTTGGCCTCAGAACAAGTGGAAACCAGCCATCCTCCTGATACTTCTGGACCATACAGAGTTCTTCTTAAGCAACATGAGTCAGATGGAAAAAATGCACCGACGAATTGGGAGGATTCAGAGACAACCAATGCATCGTATATTGATGGCAGGGACAGACCAAGAATGAAAGTTTGGGAGAACGAGCAGAGATCAAATTACAGCAAGAACGAGGAGATGGATTTGAGAACAAGTGCTCATGGTGAAGATGTTTCTTCTCAGACTTCAGAAAATCAAGTATCTAGTTCTGTCATTGTTAAGGCCAAATTTCCTGAAAGTTCAGGAAATATAAAAAGATCTAATGATATTTCAGCAAGGAAATTAGATGGTGCTCCCTCTGATATGCTAGAAGTGCCCCCAAGATCATCGGCTCCAAAAGATGCCAGTCTGATTCAGAAGATAGAGGGTTTAAATGCTAAAGCCAGGGATAATTCATCTGCTAGAATTAAAGAGGAACAAAGGAATAAGTTTCATCCCGGTAATGCTCCAATGAACTCTGTGGAAAATGAAGTTGGTACTGATGTTGTGTTTCCGACAAGAACCCATGCCACTGAAGTCATAAATCCAGCCCATCATGAAGTGGGTGCTTTTGGTGCAGAAAAGAATTTTGAATCCCTGTCTTTCAATGGAACTGCCACATCCAGGCGAGTTACTCATGGTATGCAAGGTAGAGGTGATCATCGTGGCAAAGGAAGATTAAACAATCAAGATGCTGATGGTTGGCGAAAGAAATATGTGGTTGAAGATTCCTCTGCCTCAGCAGGTGCACAGTTTGAAGCATCTAATGTTCTTGTGGGTGACCATTGTATATCTGTTAACCAAGTAAGGCACGATGGAGAATCTGTCCAAACCAGGTCTGATCCTGCTGACAACCATGCACAGCGTGCCAAAATGAAAGAGTTAGCAAAGCAACGGACTAAGCAACTGCAGGAAGAAGAGGAAGAGCGAACAAGAAAGCAAAAGGCTAAAGCTCTTGCGAAGTTGGATGAGTTGAACAGGCGTTCTCAAGCAGTGGAAGGGTCAACTCAGAAAGAGTATGCTGTAAGTTCTTCCATCCATAATAAGCAAGAGGAATTACTACCTTCTGAATCAGCAACTGCAACAGGCAAATCTGTAGCTGTCAGTTCAGCTGTAAATTGTAATGCCAATATTGTCTGTCAGATTAATGATACCAGCACAAATAAAGTGGAAAAATCACCAATCTTGTCCAGTGAGCCACCTTTAGAGACACTTAAGAATTCTGGCAAAGAACATGTTCTGAATCGTAATCAATCAGTGACCCTGCACCAAGATGTTAATAGTGCAGATGCCACTAATGCTTTACAGGTTCACAACAATATTAGCTTAAAGCAGAAGCGGATGAGCTATAAACAAAAGCAGAATCTTCCTTTAGAAAAAACACCTAATGAAAAGGTTGTTTCTACCACCTCACCTGCCCCAAACGTTGAGAATGAGACAGCGGTTGATGTCTCTCTGTCTTCTGGCACTGTTACAAATGAAGTTGGTTCCGCCTCTGTCTCTGGCTTACCCATGAATTCATCTGCTGTGGTTGAGTCTTCAGTAAACCTGAAAAAAAAGAATAACAGGAATGGCAAAAACAAACACAAAGTTGAAGAGAATTCATCTCTGGCTGCACTACCATCGGCAATACCAAAAGAAGCCAATCTTTCAAAAAATTCAGTAGAAAGTGACAAGTCCAAGGCTTCAGACTTTGAGTTAGATCAGGGCTCACTTCAGCCAGCAGCACCCTTGTCTAAAGATCCAAATGAGATTTCAGAGCAATGTAGGCATTTAGCAAATGAGGAATCCCATGGTAGGATGAATAGCCAGTGGAAATCACAACATTCTCGTAGGACACCAAGAAATATGCATGCTAATAGACCAGCAGAGAAATCTCATGGGAGTGATGCTGTGATGTGGGCACCTGTTAAACCACAGAACAAGACTGAGGTCATGGATGAATCAAGTGAGAAAAGTAAAACTGAGGAAGTTAATCCTGTTAAGAGTGATCAGCAGTTGCATAATTTGAAAAATAAAAGGGCAGAAATGGAGAGGTATATTCCAAAACCTGTTGCAAAAGAAATGGCTCAGCAAGGAAACAACACACAACAGGTAGCTTCATCAATCAGTCAGGCTCGCACTGATGATATTGTTGGAAGAGTTGATTCTGGATTGCAAGGCCCCCAGATCACTCAGCATACTAATTTGGTTGTAGGAAGAATGGATTCTGGAATGGAGTCTAAAAATAGAGATGGCAGGCATAATAAGCAAGGGAAAGCGCATGGATCATGGCGGCAACGAAACCCAACAGAATCAACTAATGTGCATGATATGCAGGATGGACTGGACCATGATTCAAACTCTGAGCCAAATGTTCAGAGACCAAAAGAGCATCATGATGATCAGAAGTCTGAAATAAGCTTCATGAGAGGGCAAACAAAGCATTTTAATGACTCTAGTGATCTTGATGGTTCTAACAATCCCGACAATCATGATTCAGCTGCTTTGGTTTCTGTTCCTGTAATTAAAGATCATGCAGCAATAGGCAGAGGGAGGCGGGCTCCTTTCAGAGGACATAAGGGTATGGTAGGGGTGAACCATGATGCTGATCACAGAAAAATTGCTGGGGAGACAGAGAAAATTGAAACACGTATCTCTGAGCATGGTCAACCAGACGTTGGTGCTTCTAAAGAAAATCGAGGTGTTGGGGAACGTTTTACATCTCAATGGCAACCCAAATCTCAAACATCTAATAATCAGACAGGAAACAGACCCAATGATCAAAATGTTAGCTCAGTGGTCGATGGATCTAACAAAAAGGATGTCACTCATGATGGTGACTCTCTTCCAGCAGGCCGTAGCAGGAGTTCTAATGCTCATGGAGAAACTCCACATTTTGGCAATCAAGAGGCTAAAAGAGAGAAGAAAAATGCTCCACCAAGAAGGCGTCCCCACTCCCCAAATCAAGCATCTGGCAGCTTGGTTGAGCCGGCTCCAACAAGTATGGATCCTTTGCATGAGCAACACCTGCCATCAGGGTTTGGCAAAAATGGAAACCAAAATAGGTTTGGAAGAGGTCATGAATCTCGTGGAGATTGGAAGTCATCTGCCCAAGATAACAGACGTCATAACCAACCTACAAACCGGGAAAGGCAGGGCTCAAACTTGCATTATGAGTATCACCCTGTTGGGCCACATGAGGACAGCAAATTGGATAACTTTGAACGACCTAAAGATGGTAACCATGGTGGGGGAAGATTTAGGGAGAGAGGTCAAACTCATTCACGACGAGAAGCCATGCATCCATTAACTGTGCTGCTATATTCAGCTTTCAGGGCTAGGAGCGATGAAGAGGGTGCCCCTGTTTTTTTGGGGGGCTGGGGGCAGAAAAGGTTTGATGGTTAG 4782 0.4452 MTSSMLSGERRWASSRRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGSRSSSSASNAWGSSSLSPNADGGTSSPSHLSARPSSGGSGTRPSTAGSDRALEPTTNAWGSNSRPSSASGALPTNQSSLTSLRPRSAETRPGSSQLSRFAEPLTESSGAWSAARTTEKLGVTQPKNDEFSLSSGDFPTLGSEKDKSALNSELQDHISHARPGSSSGLRKEINETSVGDDVPVNANIKGGAVDSWRRDYQAYNEDGVRPSLEKWHGNSQPYRNAGFPPQHYDAWHGPPVNNPQSCVWFRGPPSGPPFGNPVPPSGFPIEPFPYYRPHIPPTGLANPPLVPPPGTAPRGHHKNGDVYRPHMPDAYIRPGIPIRPGFYPGSMAYEGYYNPPMGYCNSNERDAPFMGMASGPPVFNRYSNQNPPEPGNSQGRSGAYGNAEKHLASEQVETSHPPDTSGPYRVLLKQHESDGKNAPTNWEDSETTNASYIDGRDRPRMKVWENEQRSNYSKNEEMDLRTSAHGEDVSSQTSENQVSSSVIVKAKFPESSGNIKRSNDISARKLDGAPSDMLEVPPRSSAPKDASLIQKIEGLNAKARDNSSARIKEEQRNKFHPGNAPMNSVENEVGTDVVFPTRTHATEVINPAHHEVGAFGAEKNFESLSFNGTATSRRVTHGMQGRGDHRGKGRLNNQDADGWRKKYVVEDSSASAGAQFEASNVLVGDHCISVNQVRHDGESVQTRSDPADNHAQRAKMKELAKQRTKQLQEEEEERTRKQKAKALAKLDELNRRSQAVEGSTQKEYAVSSSIHNKQEELLPSESATATGKSVAVSSAVNCNANIVCQINDTSTNKVEKSPILSSEPPLETLKNSGKEHVLNRNQSVTLHQDVNSADATNALQVHNNISLKQKRMSYKQKQNLPLEKTPNEKVVSTTSPAPNVENETAVDVSLSSGTVTNEVGSASVSGLPMNSSAVVESSVNLKKKNNRNGKNKHKVEENSSLAALPSAIPKEANLSKNSVESDKSKASDFELDQGSLQPAAPLSKDPNEISEQCRHLANEESHGRMNSQWKSQHSRRTPRNMHANRPAEKSHGSDAVMWAPVKPQNKTEVMDESSEKSKTEEVNPVKSDQQLHNLKNKRAEMERYIPKPVAKEMAQQGNNTQQVASSISQARTDDIVGRVDSGLQGPQITQHTNLVVGRMDSGMESKNRDGRHNKQGKAHGSWRQRNPTESTNVHDMQDGLDHDSNSEPNVQRPKEHHDDQKSEISFMRGQTKHFNDSSDLDGSNNPDNHDSAALVSVPVIKDHAAIGRGRRAPFRGHKGMVGVNHDADHRKIAGETEKIETRISEHGQPDVGASKENRGVGERFTSQWQPKSQTSNNQTGNRPNDQNVSSVVDGSNKKDVTHDGDSLPAGRSRSSNAHGETPHFGNQEAKREKKNAPPRRRPHSPNQASGSLVEPAPTSMDPLHEQHLPSGFGKNGNQNRFGRGHESRGDWKSSAQDNRRHNQPTNRERQGSNLHYEYHPVGPHEDSKLDNFERPKDGNHGGGRFRERGQTHSRREAMHPLTVLLYSAFRARSDEEGAPVFLGGWGQKRFDG. 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1409 1423 - -
Seca12g01583 1593 Pfam BAT2 N-terminus 15 140 IPR009738 -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1361 1396 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 765 793 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1106 1130 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 765 822 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 794 822 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 676 695 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1221 1235 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1482 1507 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1340 1558 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 419 440 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1236 1262 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1179 1262 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 447 466 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1203 1217 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 923 953 - -
Seca12g01583 1593 PANTHER PROTEIN MODIFIER OF SNC1 1 1 1557 IPR038808 -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 473 499 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 56 206 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1109 1130 - -
Seca12g01583 1593 Coils Coil 754 793 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 679 695 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1273 1292 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1 25 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 976 1094 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 419 441 - -
Seca12g01583 1593 MobiDBLite consensus disorder prediction 1520 1556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01583 Seca-Chr12 17079687 17087208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01583 - - gmx:100809882 2405.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01583 12 17079687 17087208 Seca12g01583 12 17079687 17087208 ECH