Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01575 ATGCTCAATTTGTTCCCCGCCCTCTGTTACCTCATTCTGTCAGCAACATATTTGATCCCTTTGAGTTCCAGCCACACCAACAACACATGCCGATCATATTGTGGAAACATAACCATAGATTACCCATTTGCACTCCAATACGGGTGCGGTCACCCGGGCTTCCGTGACCTCCTCTTCTGCATGAACGATGTTCTCATGTTTCACATAAGCTCCGGATCCTACAGGGTACTGGAAATAGACTATGCCTATCAGGCCCTCACTCTTCACGAGCCTCACATGTCAACGTGCAACAACCTCGTGCTAGGGACCAGAGGCAACGGTTTCACAGTGGAGCCATGGCGGGCCCCTTACATGAACCCCGGGCCCGACAACGTTTTCATGCTCATCGCTTGCTCAGCCCGGTCACCGTTGTTCCAAGGTTTCCCCGGGAAGCATTTGCCGTGTCGAAATGTTTCGGGCATGGGCTGCGAGGAGTATTATGGGTGCCCGGCCTGGGATAAGATTGGCCACAAAAGGCTGGGCTCGTCGTCGTTTTTTGGGTCGGGCCCACCTGAATGTTGTGCTGTGCCTTATGAGGCTATTAAGGGCATCAATCTCACTAAGCTTGAGTGCGAAGGGTATAGCAGTGCTTACAGTGTGGCACCGCTGAGGGTTGCTGGGCCTGGTGATTGGGCCTATGGGATTCGTGTGAGGTATTCGGTGCAAGGGAGTGATGAGTTCTGCGGGGCGTGTGAGGCAACTGGTGGCACGTGTGGGTATGGTTCAGATGAGATTAGGCAGGTGTGTATGTGTGGGGACTTCAATTCAACTTCCAATTGTGACTCATCAGGTTGGGCTTATTATCGTCAGGAGCAAGGCCTATGA 864 0.5266 MLNLFPALCYLILSATYLIPLSSSHTNNTCRSYCGNITIDYPFALQYGCGHPGFRDLLFCMNDVLMFHISSGSYRVLEIDYAYQALTLHEPHMSTCNNLVLGTRGNGFTVEPWRAPYMNPGPDNVFMLIACSARSPLFQGFPGKHLPCRNVSGMGCEEYYGCPAWDKIGHKRLGSSSFFGSGPPECCAVPYEAIKGINLTKLECEGYSSAYSVAPLRVAGPGDWAYGIRVRYSVQGSDEFCGACEATGGTCGYGSDEIRQVCMCGDFNSTSNCDSSGWAYYRQEQGL. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01575 287 Pfam Wall-associated receptor kinase galacturonan-binding 30 88 IPR025287 GO:0030247
Seca12g01575 287 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 8 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01575 Seca-Chr12 16963808 16965889 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01575 - - gmx:100818252 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01575 12 16963808 16965889 Seca12g01575 12 16963808 16965889 ECH