Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01554 ATGCTATTTTCTGTAATTAACAATTCAGAAAATCAATTGCTTCTTCAGGCTGATGTATTTGCTCGCGGGTATGGTGGATACAACACTAGGTGGGCTTTGTTCTTACTGCACCACATCTTCCCTCTGGAATCAAGTAAGCCACCTCTTGCTACCACAGTTTTCTTTGGTGCTAATGATGCAGCTTTGTCAGGAAGAACCAGTGAAAGGCAACATGTACCTATTGAAGAGTACAAAGGAAACCTCAGAAAAATTGTCCTACACTTACAGGAATGCTCACCAACTATGCTAATTGTGCTTATTACTCCACCTCCAGTTTGTGAGGAAGGGCGTCGAGCATATGCAATATCCTTATATGGTGAGAATGCTAGCAAATTGCCTGAAAGAACAAATGAAGCAACTGGTCAATATGCAAAAGCATGTGTTGAGATAGCTAAGGAAATGGGTGTGCGGTATATCAATATGTGGTCCAAAATGCAAGAAACAGAGGGCTGGCGAAAGAAATTTTTGAGTGATGGGTTGCACCTGACACCAGAAGGAAATGCAGTAGTCTACCAGGAAGTGATAAAGTTGTTCAATGAGGCAGGACTATCTGCTGAAAATATGCCATATGATTTCCCTCACCACTCAAAAATTGATTTTAAAAATCCTCAGAGTGCTTTCCAGAAGAATGTTTGTGAGTTGTGA 684 0.4094 MLFSVINNSENQLLLQADVFARGYGGYNTRWALFLLHHIFPLESSKPPLATTVFFGANDAALSGRTSERQHVPIEEYKGNLRKIVLHLQECSPTMLIVLITPPPVCEEGRRAYAISLYGENASKLPERTNEATGQYAKACVEIAKEMGVRYINMWSKMQETEGWRKKFLSDGLHLTPEGNAVVYQEVIKLFNEAGLSAENMPYDFPHHSKIDFKNPQSAFQKNVCEL. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01554 227 Pfam GDSL-like Lipase/Acylhydrolase family 15 181 IPR013830 -
Seca12g01554 227 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 16 219 IPR045136 -
Seca12g01554 227 SUPERFAMILY SGNH hydrolase 16 191 - -
Seca12g01554 227 CDD Isoamyl_acetate_hydrolase_like 16 190 - -
Seca12g01554 227 Gene3D SGNH hydrolase 3 219 IPR036514 -
Seca12g01554 227 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 8 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01554 Seca-Chr12 16403554 16407410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01554 K23978 - gmx:100782709 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01554 12 16403554 16407410 Seca12g01554 12 16403554 16407410 ECH