Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01546 ATGCCGACGGAGCCTCTCCGTCAGTTATCATCCTCTTCTCCAAGTTTCAGCAGCTACTCTTCTGAGACCTTCGCTCAGATAGCAGCCAGAGTCATTCATGAACTCCGCAATGACTCCAATTCCCTCAACGACACTCACTTCGACTCCTGGCAACAAAACGACGACGTCGTTGACGATGACTTCGAGTTCTCTTTCCTATCCACAGATCCCATTTCTTCCCCTGTATCCGCTGACGACATTTTCGAAAACGGCCAGATCAGACCCACTTACCCACTCTTTGACCGCACTCTGCTCAACGACGTCGCTTTGGTTTCGCCCATTAACGCTGAAACGGCGCCTCGCCCTCGTCGTTTGCCTCTGAGGAAGCTCATGTTCGAGACGGAAGACGAAAACGGCAACGAGCTCGACGGCGTGGATGCGGAAACCTACTGCGTTTGGACTCCGTCGTGCAAGAAGAGCAGCTCCACGGGGTCGACGACGTCGAAACGGTGGAAGCTTCGGGACCTGCTCCATCGGAGCCATAGTGATGGCAAGAAGGACAAACTCGCCGGCAATGGTGGCTCCGGCGCGGCGAAGGATGGGAAGAGGAAATTGTTCTTGCCTCAGGAATTGGTTGGATTGTTCAATCGGAAATCGTAA 639 0.5383 MPTEPLRQLSSSSPSFSSYSSETFAQIAARVIHELRNDSNSLNDTHFDSWQQNDDVVDDDFEFSFLSTDPISSPVSADDIFENGQIRPTYPLFDRTLLNDVALVSPINAETAPRPRRLPLRKLMFETEDENGNELDGVDAETYCVWTPSCKKSSSTGSTTSKRWKLRDLLHRSHSDGKKDKLAGNGGSGAAKDGKRKLFLPQELVGLFNRKS. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01546 212 MobiDBLite consensus disorder prediction 170 195 - -
Seca12g01546 212 Pfam Protein of unknown function (DUF1645) 77 180 IPR012442 -
Seca12g01546 212 PANTHER OS07G0619500 PROTEIN 11 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01546 Seca-Chr12 16309115 16309753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01546 - - adu:107491733 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01546 12 16309115 16309753 Seca4g03079 4 52840515 52841384 PCT