Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01531 ATGTTAGCACCAAATCAAACGCCTCAGACCCTTCCTCTTTCTCTGCCTCAACCGTCGTCTCTTCCTCCTAACCATGCCAACAACAACAATCTCCTCCTCCGTCGCCGCCACCTCCTCCTCAGCACTACTGCATTCACCATCTCCTTCAATTTCACAACCTCACTTCCCATGTCAGAGCCGGTAGCCAGTGCCCGCGGCCTCTTCGTGATGCCTCCACCTCGCCTCACCAACCGGTATTTTCTAGTGAGGGCTGGGGAATCAGAGTTCGAGAGCATGGGAGTGATCAACACGAATCCGGTGGCGAAGACTTCTGTAGATAGCGGGTTATCTGAAAGAGGGAAGAAGCAATCATTGAGAGCAGCTTTTGATTTGAAAGAAATGGGTGCATGTGACAATAGCTGTTGGATATGGCCTGCTATCACTCAGAGAGCTTACCAGACTGCTGAGATTATTGCTTCTCTTAATGGAGTCACTCGAAGTTATATAGTCCCAGAATACAGCTTTCTGGATGCCCGTGGATTAGGTGCTTATGAAGGAAAAAATTTGGAATCTGTTTCACAAATATATGCATCAGATGGTATATCTCCAAACATCAAACCTCCTCCCATTGATGATGGAACTCCAAATGAGAGTGTTGCAGATGTTTTTGTTCGTGTGACACAACTCATGTCAATTCTTGAAACTCAGTACTCTGGTGACACAGTTGTTATAGTCTCGCCAGATTCTGACAACTTGTCAATCCTTCAGGCTGGTTTGATAGGACTAGACCTGCGAAGGTAA 780 0.4667 MLAPNQTPQTLPLSLPQPSSLPPNHANNNNLLLRRRHLLLSTTAFTISFNFTTSLPMSEPVASARGLFVMPPPRLTNRYFLVRAGESEFESMGVINTNPVAKTSVDSGLSERGKKQSLRAAFDLKEMGACDNSCWIWPAITQRAYQTAEIIASLNGVTRSYIVPEYSFLDARGLGAYEGKNLESVSQIYASDGISPNIKPPPIDDGTPNESVADVFVRVTQLMSILETQYSGDTVVIVSPDSDNLSILQAGLIGLDLRR. 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01531 259 SUPERFAMILY Phosphoglycerate mutase-like 78 241 IPR029033 -
Seca12g01531 259 CDD HP_PGM_like 78 152 IPR013078 -
Seca12g01531 259 Gene3D - 73 259 IPR029033 -
Seca12g01531 259 Pfam Histidine phosphatase superfamily (branch 1) 80 239 IPR013078 -
Seca12g01531 259 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 18 259 - -
Seca12g01531 259 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01531 Seca-Chr12 16108158 16110329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01531 - - gmx:100813102 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01531 12 16108158 16110329 Seca12g01531 12 16108158 16110329 ECH