Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01528 ATGAATTGTGCATTATGGGCATTCTATGGAATGCCGTTTGTAAGTCCGCATAACATTCTTGTCCTCACAATTAATTCCATTGGCTTCTTCATTGAGATCTTCTACACTTGTGTCTTTATCATATACTCAGTGGGGAGTAAGCGAAGGAGGATCTTGCTTATCGTTCTAGTTGAAGTCATCTTCATTGTGTTAGTGGTATTTTTAGTCATGTACCTTGTTGACTCCCACAAACAGAGAAAAAACATTACTGGACCTATATGCATAGTTTTCAACATCCTAATGTACTTTGCACCCTTGACTGTCATGAAACAAGTAATTAAAACGAAGAGTGTGAAGTACATGCCTTTCTTACTTTCACTGGCTAACTTCCTCAATGGAATCATCTGGACGACCTATGCACTCCTTAAATGGGATCCATTTGTTGTGATTCCAAATAGTTTGGGAACAATTGCTGGGTTTGCGCAGCTGGTGTTGTATGGCATTTACTACAAATCAACCAATTGGCACGAAGATAGCCCACCTCGTGTGAGTGTATGA 537 0.3966 MNCALWAFYGMPFVSPHNILVLTINSIGFFIEIFYTCVFIIYSVGSKRRRILLIVLVEVIFIVLVVFLVMYLVDSHKQRKNITGPICIVFNILMYFAPLTVMKQVIKTKSVKYMPFLLSLANFLNGIIWTTYALLKWDPFVVIPNSLGTIAGFAQLVLYGIYYKSTNWHEDSPPRVSV. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01528 178 Gene3D - 76 169 - -
Seca12g01528 178 Gene3D - 1 48 - -
Seca12g01528 178 PANTHER RAG1-ACTIVATING PROTEIN 1 1 168 IPR047664 -
Seca12g01528 178 FunFam Bidirectional sugar transporter SWEET 79 172 - -
Seca12g01528 178 Pfam Sugar efflux transporter for intercellular exchange 84 166 IPR004316 GO:0016020
Seca12g01528 178 Pfam Sugar efflux transporter for intercellular exchange 2 43 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01528 Seca-Chr12 16020143 16021104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01528 1 171 Miscellaneous Gene Families AT5G62850 47.368 1.63e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01528 K15382 - gmx:100810948 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01528 12 16020143 16021104 Seca12g01528 12 16020143 16021104 ECH