Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01490 ATGGTTGTTAACTTGCAGTTTTCTCGGGGGACTTTCTTCAAACACCTTACGACGCGGAAATTGACACCACTCTGTCAGTATAAATCCAGTCACACTCTCTCCAACTTCGGAACCCTAACCTCCCGCCAGAAAGACCAAATCCATCTCTACGTCGACGCTCTTCTTCAATGGAACAAGCGCATGAATCTGACCGCAGTTAAAGAGGTGAATGATGTCATGGAAAGGCACGTGGAGGACTCCCTTGCTATTTTGCCTCCGTTGAGCGATTCTTATCGCACGCACTGCGGCGCTTCCTCCGGCAAGCTCAACCTCGTTGATGTTGGAACTGGCGCTGGCCTTCCCGGAGTGGTTCTGGCCATAGCTCGTCCAGAATGGGATGTAACGCTGCTCGAGTCTATGAACAAGCGGTGCGTCTTCTTGGAGCATGTTGTCAGTGTTATCGGTTCCTCCAACATTCAAATTGTAAGAGGAAGAGCAGAGAGTCTAGGTCAGAATCATGGCTTCAGAGAGCAATTTGACATAGCTGTAGCCAGGGCAGTTGCAGAGATGAGAATATTGGCTGAGTATTGTCTTCCTTTTGTTCGTGTTGGTGGATTGTTTATTGCCGCCAAGGGTCATGATCCTGAGGACTGCGGAATCTTTTGGATGAGTATTTCAAACTTGACTTGA 669 0.4858 MVVNLQFSRGTFFKHLTTRKLTPLCQYKSSHTLSNFGTLTSRQKDQIHLYVDALLQWNKRMNLTAVKEVNDVMERHVEDSLAILPPLSDSYRTHCGASSGKLNLVDVGTGAGLPGVVLAIARPEWDVTLLESMNKRCVFLEHVVSVIGSSNIQIVRGRAESLGQNHGFREQFDIAVARAVAEMRILAEYCLPFVRVGGLFIAAKGHDPEDCGIFWMSISNLT. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01490 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 34 216 IPR029063 -
Seca12g01490 222 Pfam rRNA small subunit methyltransferase G 44 210 IPR003682 GO:0005737|GO:0006364|GO:0008649
Seca12g01490 222 Gene3D Vaccinia Virus protein VP39 17 212 IPR029063 -
Seca12g01490 222 NCBIfam 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 49 209 IPR003682 GO:0005737|GO:0006364|GO:0008649
Seca12g01490 222 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 210 IPR003682 GO:0005737|GO:0006364|GO:0008649
Seca12g01490 222 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 36 222 IPR003682 GO:0005737|GO:0006364|GO:0008649
Seca12g01490 222 FunFam Ribosomal RNA small subunit methyltransferase G 24 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01490 Seca-Chr12 15137318 15148889 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01490 K03501 - gmx:100818428 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01490 12 15137318 15148889 Seca12g01490 12 15137318 15148889 ECH