Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01463 ATGAATGAAGCAAGCAAATTTCTTTCTTTCTTCAGTTTCATTTATTTTCCCAACACCTCAAAGGCCTATCTCAGTTTCTGTATCATATCATATCATCCTCCCAAAACCAAACCAAAACAAAACCACACCAAACCAAACCAAAAACAGAAAAAAAAAAAACACTCTTTTACCTTCTTCCTTCCCACCGTCCCAAATTCCAACATGGCACACCGCTACTCCCAACGGCGGAACTTGGCACCTCCAGAACCCAATCCACCGTCCATTCCGGCAAAGCACCACCCAAGACCCACCACCACCACCACCTTCACAGCTTCCCCTTCTCACCACTCAACACTAAACCCAGATCTCATCCAAGCCTCTAAGACCTCTTTCCTTGTAAAACCCTTCTCAAGCCTTAACTTGAGTCACAAACCCCGTGCACCCCACAAACAATCATCACAAACCAAACACCCCCTTCTCGTTGACACTCGTTTGCAGGCCAAAGCCATGACAACCTCTGCCATAGTTGATTCCTCCAAATCTTCTTCACTCCTCAAACCAAATACCCACAACACTCCAAGGCTTGAAAAGGAGAGTACTTTTACTACTTTACCTTCCAAGAGAACCCATAATAAGGAAAAGCCCCAAAAGCAAGGTTTAGAATTGGAAAGGAGGAAACTTCACAGCTTGATGAAAAATGAGAAGAAGGAAGATCCCAATCCCAATCCCAATCCCAATAATAGGTGTGTGGTTAAGGATGTTAAGAATGAGAAAGAACATGATGTTGTGGAAAGATTGTCTTTTTCTCTGGCTCAAGGTGGGGGTAGGAGAAGATCCTTTTGTGGGTCATTGATTGATTTAGGAGATGTGTTTGCAATCAATGGGGCAAAAATGGTTTCAGCTGATATGCCACCGTTTATGCAGATCCATGCTGTGGATTGTGCCAGAAAAGCTTTAGATAGTATGGAGAAATTCACATCCAAGACCCTTGCCTTATCCCTCAAGAAGGAATTTGATGGGGTGTATGGACCGGCATGGCACTGTATTGTGGGGACTAGTTTTGGGTCTTTTGTGACCCATTCCGTTGGAGGGTTTCTATATTTTTCAATGGATCAAAAATTATACATCCTCTTATTTAAGACCGCTGTACAAAAAGCAGATTGA 1143 0.4313 MNEASKFLSFFSFIYFPNTSKAYLSFCIISYHPPKTKPKQNHTKPNQKQKKKKHSFTFFLPTVPNSNMAHRYSQRRNLAPPEPNPPSIPAKHHPRPTTTTTFTASPSHHSTLNPDLIQASKTSFLVKPFSSLNLSHKPRAPHKQSSQTKHPLLVDTRLQAKAMTTSAIVDSSKSSSLLKPNTHNTPRLEKESTFTTLPSKRTHNKEKPQKQGLELERRKLHSLMKNEKKEDPNPNPNPNNRCVVKDVKNEKEHDVVERLSFSLAQGGGRRRSFCGSLIDLGDVFAINGAKMVSADMPPFMQIHAVDCARKALDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQKAD. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01463 380 MobiDBLite consensus disorder prediction 165 193 - -
Seca12g01463 380 FunFam Dynein light chain 280 375 - -
Seca12g01463 380 Pfam Dynein light chain type 1 290 374 IPR001372 GO:0007017|GO:0030286
Seca12g01463 380 Coils Coil 210 230 - -
Seca12g01463 380 MobiDBLite consensus disorder prediction 75 110 - -
Seca12g01463 380 SUPERFAMILY DLC 288 374 IPR037177 GO:0007017|GO:0030286
Seca12g01463 380 CDD DLC-like_DYNLL1_DYNLL2 293 374 - -
Seca12g01463 380 PANTHER DYNEIN LIGHT CHAIN 289 374 IPR001372 GO:0007017|GO:0030286
Seca12g01463 380 MobiDBLite consensus disorder prediction 35 54 - -
Seca12g01463 380 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 285 375 IPR037177 GO:0007017|GO:0030286
Seca12g01463 380 MobiDBLite consensus disorder prediction 165 217 - -
Seca12g01463 380 MobiDBLite consensus disorder prediction 93 110 - -
Seca12g01463 380 MobiDBLite consensus disorder prediction 37 54 - -
Seca12g01463 380 SMART Dynein_light_2 284 374 IPR001372 GO:0007017|GO:0030286
Seca12g01463 380 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01463 Seca-Chr12 14752495 14754379 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01463 - - aprc:113847721 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01463 12 14752495 14754379 Seca12g01463 12 14752495 14754379 ECH