Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01456 ATGCGGGAGAAGGGTGAGACCCCTGTTATGTTCAGTCATTTGGGGCCTCCTCGAAGGAGAACAACTGCAGAGGAAGAAGAGAGAGTTAAACACCCAAAGCCTGAGGACTCTGTTTATTACCATCCTACATTAAATCCTACTGGGGCTCCACCACCAGGGAAACCTCCTATGTTTAAATCGTCTATAGGACCCAGAATTCCTTTGTCTGGTGCTTCATCAAGTACTGCTGCATCATCCTCCGCAACAGAGTCAGAGGAAGATGTATTAGCTGTGCCTCCACCTCCCCCACCGCCACCACTGCCTGATGCTAGCAATGTGAGTTCAGCAGATGGTTCTGTTTTACCTGCATCTTTGCCACTGCCTCCTCCACCTCCCATGCCTCCACCAAAGCCTGCTACTGCTGTGCCTACATCATTACCACCACCTCCTTTGCCACCTCCACCTCCTGGTCCTCCCCCTAAAGAGCAAGTTGCAAATCGGCCTATACCCCCTCCACCTCCACCCCTGCAACAGTCTCAGCCACCTCCACCTGGCACCAGTGGAGGCGAAGAGAGAAATCAGTCTGCATTGGCAGATAGCTCACCTTCCAAGGAGCCTGGTCAGGTGCAGCTTCCTCCTCCTCCTCCTCCACCAAGTCGGGTGCCACCAAAGTCTGGTGCTATTCAGCCTGATGGTGCTGGGGTTTCTACTGACAATAAGAATTCTCTGTCAAGTCAGGAGATCCCAAAAATGGTTCCAGGGCCTCCTCCAAGGCAACAACCTCCTGTTCCAGGACCCTCATTAATCCCAAGTTTACAGCCTGATGTTTTGCCCCCCGGAATATCTCGATTCCCGCCACCCCCACCACCACCTGATATGAGGCCTCCCTTACCTGTGGCAGGACTCCCTGGTCAGGCACCACCTCCTGGAATGATGGTCCCCATAATTCCTAGGCCACCATATGGTCCTCCACCTGGGCCCCCTCCAATGATGAGACCACCACTTCCACCTGGTCCTCCTCCAAACTTCCAGGAAGAGGATATGGCAGCTAGGCTGCCTCCTCCTCCTCAGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTTACAGCTATGGTTCCTGCGTCTGTGCGAGTGAGAAGAGAGACTGCAATGGCTAAGACAAAACCAAAGCAGACACTGACAGCCTCTAGGACAGTCTCCGCGACATCAGGACCGACTATTGTAAAAGCAGAGTCAAGTGTTCTTTCCATCAGCTTCTTGTTTTGTTGCTTCTTGCTGCTGTTGGATTCTTCAACTTCACTTCCTCTTTGTGTTGATTCAAGGGCACCCTTTACCCTCAATTCCACACTCCAATTTTGCCCTTACAATGGAAGCACGTGTTGCAACTCCACAGAAGATGCACAAATACAGAAGCAATTGCAACTGATGAATATATCTGATCCCGGCTGTGCCTCGCTTTTGAAGTCAATACTTTGTGCGAGGTGTGACCCTTTTTCAGCAGAACTATTTACAGTTCAATCCACACCCAGATCAGTTCCTGTGCTTTGCAATTCAGCCATTCCAGCAAACTCTTCTCAGTCAAAGGCATCAGTGCAGGACTTCTGCTCTGAAGTATGGGATACATGTCAAACTGTGTCAATAATAAACTCACCATTTTCACCTTCATTACAAGGTCAAGGAGGAGGACTACCACTTAATACCAATGGAACAAAACTGACTGATTTATGGCAGTCCAAAACAGATTTTTGCAATGCATTTGGTGGGGCCTCCAATAATGAATCAGTATGCTTTGAGGGTGAACCTGTTGCATTAAACAAAACTGAGACTCCTATCAATCCCCCTCATGGCTTGTGCCTTGAGAAAATTGGGAATGGATCTTATCTCAATATGGTTGCTCATCCTGATGGCTCCAACCGTGCATTCTTCTCTAATCAAATGGGTAAAGTTTGGTTGGCAACTATTCCAGATGAGGGATTAGGAGGACAATTGGAGCTTGATGAGTCAAGTCCCTTTGTTGATCTAACTGATCAAGTTTATTTTGATACTCAATTTGGAATGATGGGCATGGCATTTCATCCAAATTTTGCAAAGAATGGTAGATTCTTTGCTTCATTTACCTGCAATAAAGATAAGTGGTCAGGGTGTAATGGAATATGTTCTTGTAATTCAAATGTTAATTGTGATCCATCAAAGCTTGGTACTGATAATGGTGCTCAACCATGTCAATATCAAACTGTTATTGCAGAATATACTGCTAATGGTACTGCTTCTCAGCCATCCTTGGCGGAAAGTGCTAAACCAACAGAAGTGAGAAGGATATTCACCATGGGCCTCCCATTTACATCTCAACATGGAGGTCAGATACTCTTTGGACCTAATGATGGATATTTATATTTCATGATGGGATATGGAGGAGGTCAAGGTGATCCATATAATTTTGCCCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATGTAGACAACACTCCAAGTGCATCAGAAATTAACAAACTTGGCCTTTGGGGTAGCTACTCCATTCCTAAGGATAATCCATTCAGTGAAGATAAAGGTGTGCAGCATGAAATATGGGCCTTGGGATTAAGAAATCCTTGGCGATGCAGTTTCGATTCAGAAAGACCTTCCTACTTTTTTTGTGCAGATGTTGGGCAGGATGTTTACGAGGAAGTAGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTGTTTATGAGGGACCCTATCTATTCACTCCAACAGAGTCACCTGGAGGCAATACCTCTCTTAATTCCATAAATCCAATTCCCCCAATATTGGGATACAACCATTCTGAAATAAACAAGAATGAAGGATCAGCATCAATCACTGGGGGATATGTCTATAGATCTAGGACTGATCCTTGCCTGTACGGAAGGTACTTGTATGCTGATCTATATGCGGGTGCAATGTGGGCAGCCATAGAAGACCCTGAAAACAGTGGAAATTTCACCACTACAAGAATCCCTTTCAGTTGTGCTCATGATTCTCCTATCCAATGTGACTCAGTACCTGGAAGCTCCCTTGCAGCTCTAGGCTACATCTATTCATTTGGTGAAGACAATAAAAAAGATGTTTATATTCTTGCAAGCACTGGTGTTTACAGAGTTGTTCGTCCAAGTCGCTGTAATTTTGCTTGCTCACAGGAAAAGGCAACTACTACTACTACTACTTCTTCTCCTTCTCCATCTCATGCAAGCCATTGGAATAACTTTTATGGATATTTATTTCTGCAGCTTTCATCTTTCTTTTTGCTTTTGATGTGTTTTATGTAG 3336 0.4532 MREKGETPVMFSHLGPPRRRTTAEEEERVKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLSGASSSTAASSSATESEEDVLAVPPPPPPPPLPDASNVSSADGSVLPASLPLPPPPPMPPPKPATAVPTSLPPPPLPPPPPGPPPKEQVANRPIPPPPPPLQQSQPPPPGTSGGEERNQSALADSSPSKEPGQVQLPPPPPPPSRVPPKSGAIQPDGAGVSTDNKNSLSSQEIPKMVPGPPPRQQPPVPGPSLIPSLQPDVLPPGISRFPPPPPPPDMRPPLPVAGLPGQAPPPGMMVPIIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDMAARLPPPPQKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRRETAMAKTKPKQTLTASRTVSATSGPTIVKAESSVLSISFLFCCFLLLLDSSTSLPLCVDSRAPFTLNSTLQFCPYNGSTCCNSTEDAQIQKQLQLMNISDPGCASLLKSILCARCDPFSAELFTVQSTPRSVPVLCNSAIPANSSQSKASVQDFCSEVWDTCQTVSIINSPFSPSLQGQGGGLPLNTNGTKLTDLWQSKTDFCNAFGGASNNESVCFEGEPVALNKTETPINPPHGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQMGKVWLATIPDEGLGGQLELDESSPFVDLTDQVYFDTQFGMMGMAFHPNFAKNGRFFASFTCNKDKWSGCNGICSCNSNVNCDPSKLGTDNGAQPCQYQTVIAEYTANGTASQPSLAESAKPTEVRRIFTMGLPFTSQHGGQILFGPNDGYLYFMMGYGGGQGDPYNFAQNKKSLLGKIMRLDVDNTPSASEINKLGLWGSYSIPKDNPFSEDKGVQHEIWALGLRNPWRCSFDSERPSYFFCADVGQDVYEEVDLITKGGNYGWRVYEGPYLFTPTESPGGNTSLNSINPIPPILGYNHSEINKNEGSASITGGYVYRSRTDPCLYGRYLYADLYAGAMWAAIEDPENSGNFTTTRIPFSCAHDSPIQCDSVPGSSLAALGYIYSFGEDNKKDVYILASTGVYRVVRPSRCNFACSQEKATTTTTTSSPSPSHASHWNNFYGYLFLQLSSFFLLLMCFM. 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01456 1111 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 619 928 IPR011041 -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 243 336 - -
Seca12g01456 1111 PANTHER HEDGEHOG-INTERACTING PROTEIN 472 1077 - -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 89 103 - -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 225 241 - -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 18 37 - -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 66 85 - -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 176 199 - -
Seca12g01456 1111 FunFam HHIP-like 1 627 1052 - -
Seca12g01456 1111 Pfam Glucose / Sorbosone dehydrogenase 645 920 IPR012938 -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 116 175 - -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 1 338 - -
Seca12g01456 1111 MobiDBLite consensus disorder prediction 200 217 - -
Seca12g01456 1111 Gene3D - 629 1039 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01456 Seca-Chr12 14685156 14700551 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01456 - - gmx:100776176 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01456 12 14685156 14700551 Seca12g01456 12 14685156 14700551 ECH