Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01429 ATGGGAAATCTTTTGTGTTGCGTGCAAGTTGACCAATCTACGGTGGCTATAAAAGAAGGATTTGGACAATTTAACGAGGTGCTTCAGCCGGGATGCCATTTCATGCCATGGTTTCTTGGAAAACGACTTGCTGGTCATCTCTCTCTTCGGCTACAGCAATTGGATGTTCGATGTGAGACCAAGACAAAGGATAATGTCTTTGTCAACGTTGTTGCTTCTATTCAATATCGTGCCCTGGCAGACAAGGCCAGTGATGCTTTTTACAAACTTAGCAATACAAGGACCCAAATTCAAGCCTATGTTTCTGAAATTTCTACTCTCATTGCAGTAATTAGGGCAAGTGTTCCAAAACTCAACTTGGATGATGCTTTTGAGCAGAAAAATGAAATTGCCAAAGCTGTGGAAGAAGAACTTGAGAAGGCTATGTCAGCTTATGGATATGAAATCGTTCAAACACTGATTGTTGATATAGAGCCAGATGAGCATGTTAAGCGGGCTATGAATGAAATCAATGCTGCTGCAAGATTGAGGGTGGCAGCTAATGAGAAGGCAGAGGCAGAGAAGATCTTGCAAATTAAGCGAGCTGAGGGTGAGGCCGAGGCTAAATATCTCTCTGGGCTGGGTATTGCTCGCCAACGTCAAGCCATTGTGGATGGCTTGAGAGACAGTGTGCTTGGATTCTCAGTTAATGTACCAGGGACGACTGCAAAAGATGTCATGGACATGGTCCTTGTCACTCAGTATTTTGACACTATGAAAGAAATTGGCGCTGCCTCCAAGTCTTCTGCTGTGTTCATTCCACATGGACCCGGTGCTGTTCGTGATGTAGCAAGCCAAATTCGTGATGGACTTCTTCAGGCTTCTCATCACTAG 873 0.4433 MGNLLCCVQVDQSTVAIKEGFGQFNEVLQPGCHFMPWFLGKRLAGHLSLRLQQLDVRCETKTKDNVFVNVVASIQYRALADKASDAFYKLSNTRTQIQAYVSEISTLIAVIRASVPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTTAKDVMDMVLVTQYFDTMKEIGAASKSSAVFIPHGPGAVRDVASQIRDGLLQASHH. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01429 290 Coils Coil 163 196 - -
Seca12g01429 290 FunFam Hypersensitive-induced response protein 1 41 173 - -
Seca12g01429 290 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 5 288 - -
Seca12g01429 290 Pfam SPFH domain / Band 7 family 9 188 IPR001107 -
Seca12g01429 290 SUPERFAMILY Band 7/SPFH domain 46 177 IPR036013 -
Seca12g01429 290 Coils Coil 120 144 - -
Seca12g01429 290 CDD SPFH_like_u4 10 284 - -
Seca12g01429 290 Gene3D Band 7 domain 44 173 IPR036013 -
Seca12g01429 290 SMART PHB_4 5 171 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01429 Seca-Chr12 14303598 14307635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01429 - - mnt:21384645 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01429 12 14303598 14307635 Seca12g01429 12 14303598 14307635 ECH