Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01427 ATGAACACAACGACGCCGTTTCAGCAGCCACCGCAAACCGTGAGGAGACTGGTGGTGGACGTAGTTGACGCGCGCAACCTGCTCCCAAAAGATGGCCAAGGAAGTTCCAGCCCTTACGTCATCGCAGACTTCGACGGCCAGAGGAAGCGAACCACCACCCGGTTCAAGGAGCTTAACCCGGTTTGGAACGAGTCCCTCGAGTTCATCGTCTCTGACCCTGATAACATGGAGTTTGAGGAGCTCGAGGTTGAAGTCTATAACGACAAGAAGTTCGGCAACGGTACTGGCCGCAAGAACCAGTTTCTCGGCAGGGTGAAGCTCTACGGAACCCAGTTCTCAGCCAGAGGAGAAGAAGCTCTGGTTTACTACACGCTAGAGAAGAGAAGCGTCTTCAGTTGGATAAGGGGAGAAATTGGCCTCAGGATTTATTACTACGACGAGTTGCTTCAAGAGGATGATAAACAGCAGCAGCAGCCACCGCCTCCGCCGCAGGAGGAGCAACCTCCCGGAACAGAGCAAGAAAGGAACAATAGACCACCTGGCATGATGATGGTTGAGGAAGGAAGGGTTTTCGAGGTTCCTAGACCAATGGAGCATTGTGTTCCTCTTCCAGAAGGTCCTCCTCATTCGCCGCCGCGTGTTGTGGTTGTGGAAGAATCTCCGCCGCCGGTGGTCCATGTTCAGCAGGAGCCAACGCTACCGGAAATGTGTGGACCTCCGGCACCGGAAATGCAGTTCCATCCTGAGGTGAGGAAAATGCAGGCTGTTAGAGGGGAGAGAGTGAGGATTTTGAAGAGGCCTAACGGTGATTACTCACCGAAAGATATCTCTGGTAAGAAAACCAGTGTTGAGACAGAGAGGGTTCATCCTTTCGATCTGGTGGAACCTATGCAGTATCTGTTCGTGAGAATCGTGAAAGCACGCGGGATTGCTCCTCCTAGTGATAGTCCATATGTGAAGGTTCGAACGTCGAGTCACTACGTGAGATCGAAGCCTGCGAGTTTCCGTCCAAACGAGTCCAACGACTCGCCGGAGTGGAACCAGGTGTTTGCCCTGGGATACAACAAAACCGACGCGAACAGCGCCACGCTGGAGATTTCAGTTTGGGATTCACCAACGGAGAATTTTCTCGGCGGCGTTTGCTTCGATCTTTCCGACGTCCCCGTCCGAGACCCTCCCGACAGTCCCTTGGCTCCGCAATGGTACCGCTTAGAAGGAGGCGCCGCTGATCAGAATCCAGGCAGGGTTTCCGGTGATATCCAGCTCTCCGTCTGGATCGGCACGCAATCTGACGACGCATTCCCAGAAGCATGGAGCTCCGATGCACCGTACGTAGCACACACTCGATCGAAGGTTTACCAGTCACCGAAGCTATGGTACCTGCGTGTACAAATAATCGAAGCACAAGACCTGAATATTACTCCGAATCTGCCTCCATTGACGGCGCCGGAGATACAAGTGAAGGTGCAGCTAGGGTTCCAATCGCAGAGAACGAGGCGAGCCTCCATGAACCACCATAGTGCGTCGTTTCACTGGAACGAGGATCTTCTCTTCGTGGCAGGGGAGCCTCTAGAAGACTCAATGATCCTTCTGGTGGAAGATCGGACGACGAAGGAACCGGCGCTCCTAGGCCACGTCGTGATTCCCCTGAGCTCCATCGAGCAACGAATTGACGAGCGCCACGTGGCAGCAAAATGGTTCACGTTGGATGGTGGGTCCTACTGTGGGCGAGTCTACCTGCGCCTTTGCCTTGAGGGAGGTTATCACGTGCTAGACGAAGCGGCGCACGTGTGCAGTGACTTCCGTCCCACCGCGAAACAGCTATGGAAACCGCCCGTCGGGATTCTCGAACTTGGAATCTTAGGCGCTCGAGGGCTCCTCCCAATGAAATCCAAGGGCCCAGGAAAGGGCTCCACCGATGCTTACTGTGTGGCCAAGTACGGTAAAAAATGGGTCCGAACCCGCACCGTAACTGACAGCTTTGATCCACGCTGGAACGAGCAGTACACGTGGCAGGTCTATGACCCATGTACTGTCTTAACCGTTGGCGTGTTTGACAACTGGCGAATGTTTGCTGACGTGTCAGAGGATAAACCCGATTGCCGTATAGGGAAAGTACGCATACGTGTATCTACACTTGAGAGTAACAAGGTGTACACCAGTTCATACCCCCTTCTGGTTTTAACCCGAACCGGTTTGAAGAAAATGGGGGAAATTGAATTAGCGGTTCGATTCGCATGCCCCTCGCTGTTACCTGACACGTGTGCGGTTTACGGCCAACCGTTGCTTCCCAGAATGCACTATCTCCGCCCGCTCGGGGTGGCACAGCAGGAAGCTCTGCGCGGTGCCGCCACGAAGATGGTGGCGCAGTGGCTGGCGCGGTCAGAACCACCGTTAGGACACGAGGTGGTTAGGTACATGTTGGATGCAGACTCACATACTTGGAGCATGAGGAAGAGCAAGGCGAATTGGTTCAGAATCGTGGCGGTTTTGGCTTGGGCTGTTGGGTTGGCAAAATGGTTAGATGACATTAGACGATGGAAGAACCCAGTGACGACGGTGCTGCTTCATATTCTTTATTTGGTACTTGTTTGGTATCCGGATTTAATTGTACCCACTGGGTTCTTATACGTTGTTTTGATTGGGATATGGTATTACCGGTTTAGGCCCAAGATACCTGCTGGGATGGATACCCGATTGTCTCAGGCAGAAGCTGTTGACCCGGATGAGTTGGATGAGGAATTTGACACAATGCCAAGTTCTAAACCACCTGATTTGATTAGGGTTCGGTATGACAGGTTAAGGATGTTGGCTGCTAGGGTTCAAACGGTGTTGGGTGATTTTGCAACCCAAGGGGAAAGAGTTCAAGCTTTGGTGAGTTGGAGGGACCCAAGGGCTACTAAGTTGTTCATAGGAGTGTGTCTTGCTATCACTATCACACTCTACTCAGTGCCGCCAAAAATGGTGGCAGTGGCCTTAGGATTCTACTACCTGCGTCACCCCATGTTTCGAAACCCAATGCCGCCGGCTAGTTTGAACTTTTTCCGGCGACTTCCCAGCTTGTCTGATCGGTTGATGTAG 3081 0.5287 MNTTTPFQQPPQTVRRLVVDVVDARNLLPKDGQGSSSPYVIADFDGQRKRTTTRFKELNPVWNESLEFIVSDPDNMEFEELEVEVYNDKKFGNGTGRKNQFLGRVKLYGTQFSARGEEALVYYTLEKRSVFSWIRGEIGLRIYYYDELLQEDDKQQQQPPPPPQEEQPPGTEQERNNRPPGMMMVEEGRVFEVPRPMEHCVPLPEGPPHSPPRVVVVEESPPPVVHVQQEPTLPEMCGPPAPEMQFHPEVRKMQAVRGERVRILKRPNGDYSPKDISGKKTSVETERVHPFDLVEPMQYLFVRIVKARGIAPPSDSPYVKVRTSSHYVRSKPASFRPNESNDSPEWNQVFALGYNKTDANSATLEISVWDSPTENFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGAADQNPGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVQIIEAQDLNITPNLPPLTAPEIQVKVQLGFQSQRTRRASMNHHSASFHWNEDLLFVAGEPLEDSMILLVEDRTTKEPALLGHVVIPLSSIEQRIDERHVAAKWFTLDGGSYCGRVYLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKSKGPGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVSEDKPDCRIGKVRIRVSTLESNKVYTSSYPLLVLTRTGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPLGHEVVRYMLDADSHTWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDLIRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLAITITLYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM. 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01427 1026 CDD C2C_MCTP_PRT_plant 460 603 IPR047258 -
Seca12g01427 1026 CDD C2B_MCTP_PRT_plant 299 428 IPR047257 -
Seca12g01427 1026 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 17 1026 IPR047259 -
Seca12g01427 1026 SMART C2_3c 299 396 IPR000008 -
Seca12g01427 1026 SMART C2_3c 16 121 IPR000008 -
Seca12g01427 1026 SMART C2_3c 460 562 IPR000008 -
Seca12g01427 1026 SMART C2_3c 615 722 IPR000008 -
Seca12g01427 1026 FunFam C2 domain-containing protein 281 426 - -
Seca12g01427 1026 Pfam C2 domain 299 402 IPR000008 -
Seca12g01427 1026 Pfam C2 domain 16 108 IPR000008 -
Seca12g01427 1026 Pfam C2 domain 459 569 IPR000008 -
Seca12g01427 1026 Pfam C2 domain 614 725 IPR000008 -
Seca12g01427 1026 CDD C2A_MCTP_PRT_plant 24 146 - -
Seca12g01427 1026 ProSiteProfiles C2 domain profile. 439 567 IPR000008 -
Seca12g01427 1026 ProSiteProfiles C2 domain profile. 597 723 IPR000008 -
Seca12g01427 1026 Gene3D C2 domain 611 748 IPR035892 -
Seca12g01427 1026 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 16 165 IPR035892 -
Seca12g01427 1026 ProSiteProfiles C2 domain profile. 1 122 IPR000008 -
Seca12g01427 1026 FunFam C2 domain-containing protein 597 749 - -
Seca12g01427 1026 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 614 766 IPR035892 -
Seca12g01427 1026 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 459 605 IPR035892 -
Seca12g01427 1026 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 299 444 IPR035892 -
Seca12g01427 1026 ProSiteProfiles C2 domain profile. 277 402 IPR000008 -
Seca12g01427 1026 CDD C2D_MCTP_PRT_plant 615 742 IPR047255 -
Seca12g01427 1026 Gene3D C2 domain 445 584 IPR035892 -
Seca12g01427 1026 Pfam Plant phosphoribosyltransferase C-terminal 871 1026 IPR013583 -
Seca12g01427 1026 Gene3D C2 domain 12 179 IPR035892 -
Seca12g01427 1026 Gene3D C2 domain 295 442 IPR035892 -
Seca12g01427 1026 MobiDBLite consensus disorder prediction 152 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01427 Seca-Chr12 14295513 14298593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01427 3 1026 Lipid Metabolism Gene Families AT1G74720 71.442 0.0 1563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01427 - - gmx:100783882 1826.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01427 12 14295513 14298593 Seca12g01427 12 14295513 14298593 ECH