Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01423 ATGGATCGTCAATGGCGTCCTACTCCAAGTCTCACTCCTAGACCAATCCAATTCCAAGGCAATGTATGCCCTACTTGCTTAATCTCACACTTTCCCTTTTGCCCTCCTCCACCCTCTTCTTCCTCCACTAATTGGCCACCTCATCCAAACCCTAACGCCACTTACCTCCCCGACGCCGATAGAAACTTCAAGAGACCAAGAATCGACGACAACCACTTCTCCGACGATGAACGAAGGTTGAAGTTGATTCGCGATCACGGCGGTCTCGTCCTTCCCAACCCACCGCAACCTCAACAAAACCCTCACCACAGACCCTTACCACATCAAAACGGGTTTCGTCCTGATTCAGGCTACGACGCTTTTCAACATCTTCACAACAAAACTTCTCCTTACCCTAATGGACCCGGTTATCCCCATAGGGAGATGAATGCACCTTACCATGTGCCACCACAACCTAATGATTTTCGTCCCTCTGCCAATGTAACACTGCCGCCACATGAGGCTAATTTTCCACCTCATGAAGGGAATCAGAGTCAACGACATTATCCCTATCCTTACCCTACTGGAAGCAGTAACGCTGAGAATGTGGGTCAATTGGAGGCTTCAAGGTTCTTCAGGGGCCAGCCTCCTCTTCCTTCTTCGCCTCCACCTCCACTTCCCTTTTCTCCACCCAAGAAGCCACCTTCTCTTTTTCCTGTTCATATGAGTGCTTTGTTTAAATTTGAGCAGGAACCCTCAAAGCAGTACTTGGGAGATGCACAACCTTTTTCATTAAATCAGTTGAATGCTGAGAAACCTAAATTTATTGATGCTTCCCACTTATTTAAGCATCCACATCGAACTTCCCGTCCTGATCATTTTGTGATCATCTTTCGAGGTCTTCCAGGTAGTGGTAAGAGTTACTTGGCAAAGATGTTGCGTGATCTTGAGGTTGAAAATGGTGGTGATGCTCCACGAATTCATTCTATGGATGATTATTTTATGACTGAGGTTGAGGATAATGATGCATCAAAATCTTCAAGTTCAGGCAGAAACAAGAAGCCTGTAACAAAAAAGATCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCATTCAAGAAAACTGTTGAGGAAGGGGTTTTTACCTTCATTATCGGTATGCAACACAACAATATGATAACTAAATTATTCTTAAAACAGATGATTTCCACTATTTAG 1224 0.4453 MDRQWRPTPSLTPRPIQFQGNVCPTCLISHFPFCPPPPSSSSTNWPPHPNPNATYLPDADRNFKRPRIDDNHFSDDERRLKLIRDHGGLVLPNPPQPQQNPHHRPLPHQNGFRPDSGYDAFQHLHNKTSPYPNGPGYPHREMNAPYHVPPQPNDFRPSANVTLPPHEANFPPHEGNQSQRHYPYPYPTGSSNAENVGQLEASRFFRGQPPLPSSPPPPLPFSPPKKPPSLFPVHMSALFKFEQEPSKQYLGDAQPFSLNQLNAEKPKFIDASHLFKHPHRTSRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEDNDASKSSSSGRNKKPVTKKIMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIGMQHNNMITKLFLKQMISTI. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01423 407 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 242 387 IPR026314 GO:0005634
Seca12g01423 407 MobiDBLite consensus disorder prediction 37 53 - -
Seca12g01423 407 MobiDBLite consensus disorder prediction 209 226 - -
Seca12g01423 407 MobiDBLite consensus disorder prediction 37 183 - -
Seca12g01423 407 MobiDBLite consensus disorder prediction 205 226 - -
Seca12g01423 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 284 386 IPR027417 -
Seca12g01423 407 Gene3D - 287 403 IPR027417 -
Seca12g01423 407 MobiDBLite consensus disorder prediction 60 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01423 Seca-Chr12 14265661 14268362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01423 K17602 - gmx:100804293 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01423 12 14265661 14268362 Seca12g01423 12 14265661 14268362 ECH