Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01391 ATGAGTGCTTCGCCACACCGTTCTCGCGGCGGCGACGGCAACGGCGAGAACAGACCGAGATTCTTCGACTCAAAGACAAAGAGCATATGTTGGGGGAAGGCTGATATTGTGCCTGGCCGTCACCCTGAGAGGTGGCGCAAAGACGCTGCTGGTAACATTGTCTGCAAGCGTTTCTTCAACTGCCTCGGCTGCCTCTGCTACGAGTACGATCACATCATCCCCTTTTCCAAAGGTGGTGAATCCACGGCAGATAATTGCCAAATACTTCAATCAAGAGTGAACAGGTACAAATCAGACAAATATCAGATTGATTCGGATCAATTGAAAGGCTACTCTTGTGATATTAATTTTACTGATAAGGAGCTTGATATAATTGAGATGGCTGTTTATGGCGATGTAATCCGGCCAGGAAACCAGTGTCGTTGCAGAACTGTTGATGAAATGCTTGGCAAATTCAAGTCGAAAGACAAAACAGATCCATGCAAATTGCCATAG 495 0.4646 MSASPHRSRGGDGNGENRPRFFDSKTKSICWGKADIVPGRHPERWRKDAAGNIVCKRFFNCLGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRYKSDKYQIDSDQLKGYSCDINFTDKELDIIEMAVYGDVIRPGNQCRCRTVDEMLGKFKSKDKTDPCKLP. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01391 164 CDD HNHc 56 98 IPR003615 -
Seca12g01391 164 Gene3D - 39 115 - -
Seca12g01391 164 PANTHER HNH ENDONUCLEASE 6 144 - -
Seca12g01391 164 MobiDBLite consensus disorder prediction 1 21 - -
Seca12g01391 164 SMART HNH_5 49 95 IPR003615 -
Seca12g01391 164 Pfam HNH endonuclease 66 94 IPR002711 GO:0003676|GO:0004519|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01391 Seca-Chr12 13891879 13894237 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01391 - - psat:127073757 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01391 12 13891879 13894237 Seca12g01391 12 13891879 13894237 ECH