Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01373 ATGAGTGGCGGTGGTAGTGGCGCTACTGCTCGGAGGAGTAGCACAGAAGAAAAGAGAAGAAGAAGAAGACCCAACTCACCACTGAAGGATCGTTCCGAAACGACTTCATCCAAGTTGTCGTCTTCTTCATCCAATTCCAAACTAAGCCCCTCAGCCTCTGCCACTCTCCTCGATGACCCCACCTTTCTCTTTGAGGAATACCCTAACCCTAACCCTCGAAGCTTCCCTTACAGTGTCAAACAGCAATGTTGGGAAAAGGCCGACAAGGTCAAAGGACGAGACCCCGATCGCTGGCGCAGGGACGCCCTCGGCAACATCGTCTTTCGCAAGCTCGTAGGTTGCCCTGGTTGTCTCTGTCATGACTACGATCACATCATCCCTTACTCTAAGGGTGGGAAAAGCACGCTGGAGAACTGTCAAGTATTACAGGTAAGGTTTCTCAGTTTCTCTCCATTTCTCTGTTTCCATTTGGAGAAAGAGGGGCTCTTGGAATACGTTTTATTGTATAATGTGCTTTACTAG 522 0.4923 MSGGGSGATARRSSTEEKRRRRRPNSPLKDRSETTSSKLSSSSSNSKLSPSASATLLDDPTFLFEEYPNPNPRSFPYSVKQQCWEKADKVKGRDPDRWRRDALGNIVFRKLVGCPGCLCHDYDHIIPYSKGGKSTLENCQVLQVRFLSFSPFLCFHLEKEGLLEYVLLYNVLY. 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01373 173 MobiDBLite consensus disorder prediction 1 53 - -
Seca12g01373 173 MobiDBLite consensus disorder prediction 30 53 - -
Seca12g01373 173 MobiDBLite consensus disorder prediction 12 29 - -
Seca12g01373 173 CDD HNHc 106 142 IPR003615 -
Seca12g01373 173 PANTHER HNH ENDONUCLEASE 14 145 - -
Seca12g01373 173 Pfam HNH endonuclease 120 142 IPR002711 GO:0003676|GO:0004519|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01373 Seca-Chr12 13677666 13679431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01373 - - gmx:100500174 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01373 12 13677666 13679431 Seca12g01373 12 13677666 13679431 ECH