Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01342 ATGCCTGGAAACGAAGTAGGAGACAGGGTCCATAATTTTTTTGGTCAAGAGACCTTGTCCCAGGGCCAGTATCATTCACAAGCAGTTGACGGGAATTGGCCAGGGCTAAGCAACAATTTGTGGGCTGGTAGCCAGAGACCAACTGGTGGACCTTTTATTTCCAATTTGAAGAATTTTAATCTACAGCAATCAGATTCTGAGCAGGGACACCCAAGCACTTCACATTTGCGACATGGTTTGAACCTTGCACAGTCAAATCTGAGGCCCGACTCTGGCAGAAATCAACCCCTAAACCAACAAACAGCTGTTAATGGCTATATGCAGGGACATCAGGTTTTTCAGTCTAGGCAAAATGAAGCAAACATTTTGGGAATGGATACAGAAGCTGATTTGCATGGCATATCAAGTCTATCAAGAGGAATGTCAGTGCTAGAGTCACAACAAGGGACTGGTCCTGGTCTTGACCACTATAAGAAAAACTTGACTAGGACTGATGTTGCTGAGTCTCCTGTCAATTATGATTTTTTTGGAGGTCAACAGCAAATAAGTGGTCGACATTCAGGCATGCTTCCGTCATTTCCTAGACAGCAGTCAGGGATAAATGACATACAGCTTTTACAACAGCAAGTAATGCTCAACCAGATGCAAGAACTTCAAAGGCAGCAACAATTTCATCAACTAGAAGCTAGGCAACAGAGTTCTATGACTCCCGCTTCCTCCATCTCAAAACAGACAGTTGCAAACCATTCTCCATCTCTTATCAATGGCATTCCCATCAATGAGGCATCTAACCTTATATGGCAGCCTGAAGTTATGGCAACTAATGCAAATTGGCTCCAGCGTGGTGCATCTCCGGTTGTGCAAGGATCCCCTAATGGACTTGTGTTATCTCCTGAACAACTGCGCCTGATGGGTTTTGTTCCTAATCAGGGAGATCAGTCTCTTTATGGGCTTCCCATTTCTGGAGGATCAAGAGGTACTCCTAGCCTGTACTCTCATGTTCAAGCAGATAAGTCAGCGGCGTCCCAGCTTTCAATCCAAAACCAGTATTCTCACATTCAAGCTGACAAGCCAACACTGTCACACATATCAGCTAGTGGTAATTCATTTCCAGCTCATCAGTATGCTGCATTTTCAGATCAAACTACCTCAAATGATGGAACTTCAGTTTCAAGACAGGACATTCAAGGGAAAAGTATGTTTGGTTCAATTGCTCAAGGTATAAATAATGGACTAAATATGGAGAACTTGCAGCAATTGAATTCTGAGCAAAGAGATGTACCAATGGAAGAATTTCATGGGAGGCAAGAACTAGCTGGATCTTCTGAGACTTCACAGGACAAGGTGGTAGTTCAGGTTCCTCCACAGAATGTGGCTACCCTAGATCCAACGGAAGAGAAGATTTTGTTTGGTTCAGATGACACCCTTTGGGATGGATTTGGAAGGAATTCAGGCTTCAATATGCTGGATAGTTCAGATAGTTTTAGTGGATTTCCATCTGTTCAGAGTGGGAGTTGGAGTGCACTTATGCAGTCTGCTGTAGCTGAAACTTCTAGTAGTGAAATGGGTATACAGGAAGAGTGGAGTGGTCTAAGTTTCCGGAATACTGAACGTTCATCTGGAAATGAACGACCTTCGACCATTGATAGCAGCAAACAGCAATCAGCTTGGACTGACAATAACTTGCAGTCAGCACCCAGTATAAACTCGAGGCCTTTTCTTCGGCCGGATGACCTTAGCAGGTCCCATACCACTGTAAACTATTCTGGTCTTCCTGGATTTCATCAGTCAGGTGCTGATACTGCACAGGAACAACATGACAGATTACATACCGATTCTTCCCAGTCCCAGAGATCAATTCCACAGTTTTTAGAAAGAGGCAAGTGGTTAGATTGCAGTCCTCAGCAAAAACCAGTTGCAGAAGGGAGTCATATTTATGGGAATGCTGCTAATTCCTCCGGTTTAGAAATAAATGAAAAGGTTGTTTCAGGTTCTTGGACCCATCAGCAGACATTACCATCCCCTAGTAGTAGCAGTGAGCCATTCAATAGATCTAATGGATGGAATTCTATCAAATCAACCCCACCTGATAACAGTTCTAATCTGAAAACCCGTGAAAATGAAAATGTGTTGCAGCCCCATCGTGATATGGGCCAAGTTCCTGCTATGTGGGGGCCTGATTCTGATAATAATTCATCTGTCGGGTTGGAACATGTCAAGTCTGCAGGTAATACGCAGGTTTGTGGGGAAGATTCTGGTATGAATGGTATTGCTGCCATACCAAATTCTGGTGCTACGTGGGTCAGCCGGCCAAGCAACCATCAGCTTCCTAATGTTGATGCATGGAGACATACAGATTCTGTGGCGAGCTATAGAAGAAATGAAGGTGCAGGGAAGTATGGACATCAAATGGAGAAGAACCCTTTAGTTTTGGAATCATCGAAGAATGACAAGTCTGAAGGAGAGACACATGATATGGAAAACTCCAACAAAAGGGATAAATCAGCTGATGGTCTTGGCTCTAATCCTTCTTATCATAGAACTGGCGGAGTAAGAGAAAATCCCAGTTTTGAGGGAAGTGAATTGCGTAGCCCAAAGTTACCTGGTCAAGGAAATCGAAGACCTCCAACAACTCGTAAATTTCAGTATCACCCAATGGGGGATGTTGGTGTTGATGTAGAACCTTATTATGGAAACAAAAATGTCATAAATTCACAGCCAATGCCCCATCATCCCTTTGGAATACTTAAAAGTCAGGACCAAAGCTATCCTGGGCAGTCAAAATATGGTCATTCTGACGGGAATTATACTGAAACAGAGAAGAGGTTTGCACCTGCTTTTCAGGGTGACAAAAAAAGCTTGGATGATAATGCTTCAAAAAGTTTACTGCCTGGTCATATATCGAAAACATTGACCCCAAGTGTTGGTAATTATGCCTTGAACAAGTCTGCTTCACCCAGTCAAAATATTCTTGAGCTTCTTCATAAAGTGGATCAGTCAAGGGAGCATGGCATTGCAACAAATACGAGCACTTCTAACTGCCATTTATCTTCCAGGGTGATGGATACTGAATCTTCTGATGGGTCTGTTGGACATCCTCATAGAAATCAAAGTTCTTCATCTCAGGGATTTGGTTTGCAATTGGCTCCTCCTACTCAAAGGCTTCCTATGGTATCTTCTCATGCTACACCACAAGTTGCACCTGAGACAGTGGATAAGGGTCATACTTGGCTGGCTGCTACTCAGACATTTCCTTCTCGAGAGTCATCTCATGAAATTAGGAATAACATTTCTGGTTCCTCAGGACAAATTTTTGATAAAGCCTCACAATACAGTGGGATGGGAAATATTCCGCAGGCTTTCACATCAGGCTTTCCTTTCTCCAGGGTCCATACTCAAAATCAGAATATGGCTAATCTTGGTGGACAAGTAGCAACTACCCAATGTGACACCACAACTTTTGTTGATCGGACTGCTTCTAGGAATCAAATGGATGAATATGGTGAAAGAGCTCAAACTAGTCAATCTGAATTGGGATCTGCTCAGGACATGTCCAAGTTGAGTGGTATAAATCAAAATCGACCTGGAGATCCTGCCATGCAAATTTCCACATTGGAGGCTGGCACAGCTCCTCATCCTCCTGTTACATTTAGTGCATCTCTACATGGTGCCCCCTCAAAAGTTTTACACAATGTATGGACAAGTGTTTCTAGCAAGCAACATCCTAATGCTTTGAAGACTCCTTCCCGTCCCCAACCAATTAATATTTGTGAAACTACAGCCGGGCCCCAGAAGCCAGGTATTGGAGACTCAGAGAAAGATGGTAACGAATTCACTGGGCAGCAGGTCTTGCCTGAAAATGTCGATGCTACTGAAGAGGCTGCAAGTGCTTCACATGGGAAATGTACGCCTGATGCATCTCAATCTAGCCCTGCTGCTACTCCTAGAGATATTGAAAATTTTGGCCGGTCTTTAAGACCAAACACTTTTTTGCACCAGAATATCTCTATGCTAAATCAAGTTCAATCCATGAAAAATATGGAGATTAATTCTAACAATCAAGACATGAAGAGATTCAAAGTTTCAGATGATATGGGGGACAAACAGTTGGATTCCAACCGTGGGCAACAGTCATATGGATACAATAATATGGTCAAAGATATGTCGGGTAATAATTCTTCAGTGCCAGGTGATGGACGAGACACTAATGCATCATCTCATGAGTTGGTTGCTAATAGTAACAAGGTAGCTACTATTAGAAGTGAACATTCTCTAATTAATCCTCAGATGGCTCCATCATGGTTTGAGCAATATGGAACTTTTAAAAATGGTAAGATGTTGCCAGTTTCTGATATACGGACAATGACTCCTCCAAAAATTATGGACCAGCCTTTCATTGTAAAGAACCAATCTGGTAGTTTGCATCCAGGTAATTCAATGGAGCAAGTGAATAGCCTCAATGATGCTGATCAGCTTGGTAATGCTATGCAAAGTCCAATACCTACTTCAGTTCCAAGTGACCATGTGCTTACTCAGTTGCCTCCTCCTGTGGTTAAGCCTGATTTGCTTATGAGACCAAAGAAGCGTAAAAGTGCTACATCTGAACTCATGCCATGGCATAAAGAACTGAAACAGGGTTCTGAAAGGCTTCGAGATATAAGTGCGGCAGAATTAGACTGGGCTCAAGCTGCAAATAGATTGATTGAGAAGGTTGAGGATGATGCCGAGCTAGTTGAAGATTTGCCCATAATGAAGTCAAAAAGAAGACTTATCTTGACTACGCAGCTTATGCAGCAACTACTTAACCCTCCTCCAGCAGCAGTTCTTTCTGCAGATCTCAAGTTACATCATGATAGTGTGGTTTACTCTGTTGCTAGATTAGTGTTAGGAGATGCATGCAGTTCAGTCTCATGGTCTGGAAGTGACACTATTGCCTCTGGCAGCACTAACCACCTTCCGGATAAGCTTAAATCATCTGAGAAAATTGACCAGTGCATTTTGAAAGTGGAAGACTTTGTTGGTAGGGTGAGGAAGCTGGAAAATGATATATTGAGATTGGATAGCAGAGCCTCAATTTTGGACTCAAGAGTTGAGTGTCAAGATTTAGAAAGATTTTCTGTCATCAATCGATTTGCCAAGTTCCATGGACGGGGGCAAAATGATGGGGCAGAGACCTCATCATCCTCTGATGCAACTGCAAATGCTCAGAAACCATTCCCCCAGAAATATGTTACTGCAGTTCCAATGCCTAGAAATCTCCCAGACAGGGTACAATGTCTTTCACTTTGA 5289 0.4286 MPGNEVGDRVHNFFGQETLSQGQYHSQAVDGNWPGLSNNLWAGSQRPTGGPFISNLKNFNLQQSDSEQGHPSTSHLRHGLNLAQSNLRPDSGRNQPLNQQTAVNGYMQGHQVFQSRQNEANILGMDTEADLHGISSLSRGMSVLESQQGTGPGLDHYKKNLTRTDVAESPVNYDFFGGQQQISGRHSGMLPSFPRQQSGINDIQLLQQQVMLNQMQELQRQQQFHQLEARQQSSMTPASSISKQTVANHSPSLINGIPINEASNLIWQPEVMATNANWLQRGASPVVQGSPNGLVLSPEQLRLMGFVPNQGDQSLYGLPISGGSRGTPSLYSHVQADKSAASQLSIQNQYSHIQADKPTLSHISASGNSFPAHQYAAFSDQTTSNDGTSVSRQDIQGKSMFGSIAQGINNGLNMENLQQLNSEQRDVPMEEFHGRQELAGSSETSQDKVVVQVPPQNVATLDPTEEKILFGSDDTLWDGFGRNSGFNMLDSSDSFSGFPSVQSGSWSALMQSAVAETSSSEMGIQEEWSGLSFRNTERSSGNERPSTIDSSKQQSAWTDNNLQSAPSINSRPFLRPDDLSRSHTTVNYSGLPGFHQSGADTAQEQHDRLHTDSSQSQRSIPQFLERGKWLDCSPQQKPVAEGSHIYGNAANSSGLEINEKVVSGSWTHQQTLPSPSSSSEPFNRSNGWNSIKSTPPDNSSNLKTRENENVLQPHRDMGQVPAMWGPDSDNNSSVGLEHVKSAGNTQVCGEDSGMNGIAAIPNSGATWVSRPSNHQLPNVDAWRHTDSVASYRRNEGAGKYGHQMEKNPLVLESSKNDKSEGETHDMENSNKRDKSADGLGSNPSYHRTGGVRENPSFEGSELRSPKLPGQGNRRPPTTRKFQYHPMGDVGVDVEPYYGNKNVINSQPMPHHPFGILKSQDQSYPGQSKYGHSDGNYTETEKRFAPAFQGDKKSLDDNASKSLLPGHISKTLTPSVGNYALNKSASPSQNILELLHKVDQSREHGIATNTSTSNCHLSSRVMDTESSDGSVGHPHRNQSSSSQGFGLQLAPPTQRLPMVSSHATPQVAPETVDKGHTWLAATQTFPSRESSHEIRNNISGSSGQIFDKASQYSGMGNIPQAFTSGFPFSRVHTQNQNMANLGGQVATTQCDTTTFVDRTASRNQMDEYGERAQTSQSELGSAQDMSKLSGINQNRPGDPAMQISTLEAGTAPHPPVTFSASLHGAPSKVLHNVWTSVSSKQHPNALKTPSRPQPINICETTAGPQKPGIGDSEKDGNEFTGQQVLPENVDATEEAASASHGKCTPDASQSSPAATPRDIENFGRSLRPNTFLHQNISMLNQVQSMKNMEINSNNQDMKRFKVSDDMGDKQLDSNRGQQSYGYNNMVKDMSGNNSSVPGDGRDTNASSHELVANSNKVATIRSEHSLINPQMAPSWFEQYGTFKNGKMLPVSDIRTMTPPKIMDQPFIVKNQSGSLHPGNSMEQVNSLNDADQLGNAMQSPIPTSVPSDHVLTQLPPPVVKPDLLMRPKKRKSATSELMPWHKELKQGSERLRDISAAELDWAQAANRLIEKVEDDAELVEDLPIMKSKRRLILTTQLMQQLLNPPPAAVLSADLKLHHDSVVYSVARLVLGDACSSVSWSGSDTIASGSTNHLPDKLKSSEKIDQCILKVEDFVGRVRKLENDILRLDSRASILDSRVECQDLERFSVINRFAKFHGRGQNDGAETSSSSDATANAQKPFPQKYVTAVPMPRNLPDRVQCLSL. 1763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01342 1762 MobiDBLite consensus disorder prediction 949 972 - -
Seca12g01342 1762 Coils Coil 1561 1581 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1160 1199 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 518 570 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1004 1049 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1290 1323 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1718 1742 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 902 937 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 518 618 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1160 1200 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 665 707 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1239 1278 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1720 1739 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 580 600 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 919 933 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1239 1259 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 1301 1315 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 811 834 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 665 714 - -
Seca12g01342 1762 MobiDBLite consensus disorder prediction 793 886 - -
Seca12g01342 1762 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1 1762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01342 Seca-Chr12 13198535 13210198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01342 - - gmx:100806232 2678.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01342 12 13198535 13210198 Seca12g01342 12 13198535 13210198 ECH