Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01332 ATGGCTGCTATTGCTCTTGCACTGCTTCTTTTGGCCTTCACTGGCACTTCAAGTGCCACTTGGTGCGTTTGCAAGGATGGAAGTGATGCTGTCCTGCAGAAGACATTAGACTATGCTTGTGGAGCTGGGGCTGACTGTAACCCTCTCCATCAGAATGGGCCTTGTTTTCAACCCAACACAGTTAGAGCTCACTGTAACTATGCTGTGAATAGCTATTTCCAAAGGAAAGGACAAGCACAAGGGTCCTGTGACTTTGCAGGAACAGCTGCTATTTCTACCTCTGACCCCAGCTCTAGTGGTTGTGTCTACCCTTCAAGTGTCAGGTATGTATTTCATCCACCCAGTTCTTCATCTTCAAGCTTTTTTTTTTTTGCTGCAGGGACTGGTTCAACACCTGTGACAACTACGCCAACCATGGGCACCACACCTACCACAGGAACTCCAACAACATCCACTGGAACTCCATCAACAACCACTGGCACTACCACAACTGGTTCAACTCCATACAGCACAACTCCTGGAGTATTAGGAGGGATTGGCACTGGTATGGGACCTTCTGGATCTGGCATTAACAATGATGAAAGTCATGGTGGGCTTAGAGTTATGGACAGTAGTTTCTTCTCTGCATTCTCAATTGCTCTCTTTTCTGGCTTGATTATGCTTTGGTGGGGTTGA 675 0.4711 MAAIALALLLLAFTGTSSATWCVCKDGSDAVLQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQRKGQAQGSCDFAGTAAISTSDPSSSGCVYPSSVRYVFHPPSSSSSSFFFFAAGTGSTPVTTTPTMGTTPTTGTPTTSTGTPSTTTGTTTTGSTPYSTTPGVLGGIGTGMGPSGSGINNDESHGGLRVMDSSFFSAFSIALFSGLIMLWWG. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01332 224 SMART X8_cls 20 103 IPR012946 -
Seca12g01332 224 MobiDBLite consensus disorder prediction 134 172 - -
Seca12g01332 224 FunFam Glucan endo-1,3-beta-glucosidase 4 15 107 - -
Seca12g01332 224 Gene3D - 15 109 - -
Seca12g01332 224 PANTHER BETA-1,3 GLUCANASE 8 141 IPR044788 -
Seca12g01332 224 Pfam X8 domain 20 89 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01332 Seca-Chr12 13107314 13112153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01332 16 106 Miscellaneous Gene Families AT2G16230 45.652 8.00e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01332 - - gmx:100500078 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01332 12 13107314 13112153 Seca12g01332 12 13107314 13112153 ECH