Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01285 ATGCAGCATTTCGTGGATTTGCAAGAGAATTCCAATTTCGGTGACCCAAATTCATGGCTTTCAGCGCAAGACCACTCTTCATCCTCCCTTTCAAGCTCCATCGCTGCTGTAGCGGCAGCTAATCCCAATTTGGATCGCGTCCTCTTCAACGACCTCGTCGAGATTGTCCCTCTCGTTCAGTCCCTCATCGATCGTAAAGCAAGCCGTTCATTCACCCGCCGTGGTTCCATGATCTACACCAAGACACCTACAAGAGAATCATTGTCTAAAAGAGCAACAGATGCAAAAAGCAGGAATGCCTCTCAATCTATTCCTGCCAAAAAGAAAAGGGACCATGGAGAAAAAGAACAAGGAAAAAATGGTAGCAACAATTCTGATGCTGATAGCTTTTCTATGTTTTCTTCAAGAGCTTCAATATCTGAAAAGGACATAGAAGAGTTAGCTATATTGAAGGAGCAGATAGAGGAACTTCAGACAAAATTATGGGAGAAAGATGAACTTTTAAAGTCAGCAGAAAACTCAAGAGACCAGATGAATGCTTTTAATGCAAAACTTGATGAACTGAAACACCAGGTTTCAGAAAAGGACACTTTACTGAAGCATACTCAACAACAACTCTCTGATGCTAAGATTAAGCTTGCAGACAAGCAAGCTGCTCTTGAAAAGACACGATGGGAAACAATGACATCCAATAAGAAAGTGGAGAAACTCCAAGGCGAGCTAGATTCCATGCAAGCAGATATTTCAACATTCACGTTGTTGCTTGATAGCTTGACAAAAACTGACAGTGCTAAATACACTGATGACTATGACACCAAGCCTTATGATTTCAATCACCTGCCTGATATTGATGATTTGGACGAGATGGAATTGCAGAAAATGGAAGAAGCAAGAAAAGCTTACGCTGCTGCGGTTGCTGTTGCCAAAGAAAAACGAGATGAAGAATCTATTGCCGCCACTGCCAATGCTAGGTTACATCTTCAATCATTAGTTTTCAAGTCCAAAAACTTCAACCTGTGA 1020 0.4157 MQHFVDLQENSNFGDPNSWLSAQDHSSSSLSSSIAAVAAANPNLDRVLFNDLVEIVPLVQSLIDRKASRSFTRRGSMIYTKTPTRESLSKRATDAKSRNASQSIPAKKKRDHGEKEQGKNGSNNSDADSFSMFSSRASISEKDIEELAILKEQIEELQTKLWEKDELLKSAENSRDQMNAFNAKLDELKHQVSEKDTLLKHTQQQLSDAKIKLADKQAALEKTRWETMTSNKKVEKLQGELDSMQADISTFTLLLDSLTKTDSAKYTDDYDTKPYDFNHLPDIDDLDEMELQKMEEARKAYAAAVAVAKEKRDEESIAATANARLHLQSLVFKSKNFNL. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01285 339 Coils Coil 291 314 - -
Seca12g01285 339 MobiDBLite consensus disorder prediction 74 130 - -
Seca12g01285 339 Coils Coil 140 219 - -
Seca12g01285 339 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 1 333 IPR040289 GO:0008017|GO:0010497
Seca12g01285 339 MobiDBLite consensus disorder prediction 104 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01285 Seca-Chr12 12583740 12588066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01285 - - gmx:100806411 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01285 12 12583740 12588066 Seca12g01285 12 12583740 12588066 ECH