Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01281 ATGCAGCTGTGGAACAAAGCTCGAAGCTTTGCGGAAGAAACAGCGAAGAGATCGCAAGACCTGTCGTTGGGAGCTTACAAACTCAGCGATATCATAGCAGAAACCACCAAGGAGATCGCGGCTCAAGCTTCCAAGCACTTGGCTGAGAAGAAGGAAACGGAAAAGGATAAGGATGTAAATATCGATCTCGAGAGTTTCGGCATCACCGACGAATTGAGGGAATTCGTCAAAGGAATCACCATCACCACCTTTCAAGATTTCCCTCTTCAAGCAGATGATACAGAATTGTTTGATGTTCCTGCAGTTTCAAATGTTAGGCAGGATCTAACCGAGTGGCAGGAAACACATGCCAATCTTGTTCTTTCCACAGTAAAGGAGATTTCAAGATTGAGGTATGAGCTGTGTCCACGTGTCATGAAAGAGAGGAAGTTTTGGAGGATATATTTTATACTTCTTAATAGTCATATAGCACCCTATGAGAATAGGTACATGGAAGATGCTAAACTAAAATCATCTGAACAAGTAAAAGATAACATAGTGATGGAACCATTAGAAGTCGAATTAAACTCTATTCAAGAGATGCAGCAAGTGAAAAAAGAGACCAAAACTTCAAATTCATCGACTGAGCAAGACTTGGATGCATTTCTTCTGGGAGATACGCGAAACAGTGATGATGACCCAGGTACACCTTATTAA 696 0.4152 MQLWNKARSFAEETAKRSQDLSLGAYKLSDIIAETTKEIAAQASKHLAEKKETEKDKDVNIDLESFGITDELREFVKGITITTFQDFPLQADDTELFDVPAVSNVRQDLTEWQETHANLVLSTVKEISRLRYELCPRVMKERKFWRIYFILLNSHIAPYENRYMEDAKLKSSEQVKDNIVMEPLEVELNSIQEMQQVKKETKTSNSSTEQDLDAFLLGDTRNSDDDPGTPY. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01281 231 Gene3D BSD domain 85 168 IPR035925 -
Seca12g01281 231 MobiDBLite consensus disorder prediction 195 213 - -
Seca12g01281 231 Pfam BSD domain 111 156 IPR005607 -
Seca12g01281 231 ProSiteProfiles BSD domain profile. 104 156 IPR005607 -
Seca12g01281 231 SMART wurzfinal6 104 156 IPR005607 -
Seca12g01281 231 MobiDBLite consensus disorder prediction 195 231 - -
Seca12g01281 231 PANTHER BSD DOMAIN-CONTAINING PROTEIN 28 219 - -
Seca12g01281 231 SUPERFAMILY BSD domain-like 67 161 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01281 Seca-Chr12 12511736 12515204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01281 3 227 EF-hand Containing Proteins AT1G69030 40.070 1.81e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01281 - - psat:127073696 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01281 12 12511736 12515204 Seca12g01281 12 12511736 12515204 ECH