Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01255 ATGACGCATCTGCAAGGCACGCCGGTTTCTCATGGATTTCACATGCCTGCAGAGTGGGAACCCCACACACAGTGTTGGATGGGTTGGCCTGAACGCGCAGATAATTGGCGAGACGGTGCCGTTCATGCTCAACGGGTGTTTGCGAGGGTAGCAACTGAGATCTCGAGATTTGAGGGAGTAACAGTTTGTGTTAGTTCCGCCAAGTGGGAGAATGCGCGGAGTCAGCTACCGGATCATATTAGAGTCGTTGAGATCAGTACGAATGATTCATGGTTTCGTGACATTGGACCTACTTTTGTTGTGAGAAGGAAGACATCAAAATCTGGTGAAGCAGAGCACAGGATTGCGGGAATTGACTGGAATTTTAATAGTTGGGGAGGTATAGAAGATGGATGTTACAGTGATTGGAGTCTGGACGCCGTTGTTGCTACTAAGATTTTGGAAATTGAGAAGATTCCTAGATTTTCACATTCAATGGTGCTTGAAGGCGGAAGTATCCATGTGGATGGAAAAGGTAAGATAGTTACTGCAGTGATTTGTAAGCCTGTGGAAGGAACATGTCTTACCACTGAAGAATGTCTCTTGAACAAGAACCGGAACCCTCACTTGAGTAAGAGCCAAATAGAGGATGAGCTTAAGGCTTATCTTGGAGTCAGGAAGGTTATATGGTTGCCTCGTGGATTATATGAAGTATGCTCCTTTTATACAGGAGATGACGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGAGGCCTGGCGTGGTTCTACTGTCTTGGACTGATGATGAAACTGATCCTCAGTATGAAAGATCTGTAGAAGCATACTCTTTACTTTCAAGTGTAACTGATGCCAATGGTAGAAATTTTGAAATCATTAAAGTCCATGTTCCCGGTCCACTCTATATGACAGAGAAAGAGGCTGCTGGGGTTTTTCAGGCTGATGAGGCCAAGCCAAGACTTCCAGGTACTAGGCTTGCTGCTTCATATGTAAACTTTTACATTGCAAATGGAGCTATCATTGCACCGCAATTTGGAGATAAAAAGTGGGATGATGAAGCTGTCCGAGTCCTATCTAAAGCCTTCCCTCATCATGAAGTTGTAGGAATTGAAGGTTCCAGGGAGATTGTTTTGGCAGGTGGAAATATACACTGCATTACTCAGCAGCAACCAGCCATTTAG 1185 0.443 MTHLQGTPVSHGFHMPAEWEPHTQCWMGWPERADNWRDGAVHAQRVFARVATEISRFEGVTVCVSSAKWENARSQLPDHIRVVEISTNDSWFRDIGPTFVVRRKTSKSGEAEHRIAGIDWNFNSWGGIEDGCYSDWSLDAVVATKILEIEKIPRFSHSMVLEGGSIHVDGKGKIVTAVICKPVEGTCLTTEECLLNKNRNPHLSKSQIEDELKAYLGVRKVIWLPRGLYEVCSFYTGDDDTNGHIDNMCCFVRPGVVLLSWTDDETDPQYERSVEAYSLLSSVTDANGRNFEIIKVHVPGPLYMTEKEAAGVFQADEAKPRLPGTRLAASYVNFYIANGAIIAPQFGDKKWDDEAVRVLSKAFPHHEVVGIEGSREIVLAGGNIHCITQQQPAI. 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01255 394 NCBIfam agmatine deiminase 7 393 IPR017754 GO:0009446|GO:0047632
Seca12g01255 394 Pfam Porphyromonas-type peptidyl-arginine deiminase 14 392 IPR007466 GO:0004668|GO:0009446
Seca12g01255 394 SUPERFAMILY Pentein 3 393 - -
Seca12g01255 394 Hamap Agmatine deiminase [aguA]. 6 393 IPR017754 GO:0009446|GO:0047632
Seca12g01255 394 PANTHER AGMATINE DEIMINASE-RELATED 184 393 IPR007466 GO:0004668|GO:0009446
Seca12g01255 394 Gene3D - 3 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01255 Seca-Chr12 12266284 12271453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01255 K10536 - gmx:100811750 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01255 12 12266284 12271453 Seca12g01255 12 12266284 12271453 ECH