Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01248 ATGGCGGGAACAGAAAGGAGTGAGAGTGAGGGCGTTTTCGATTCGCTTAATCTGAATCCACAACTCTTCGTTAACGAGGCTCTCAACACCGTCGACGATGTCCTCCTTGAAGCTTTCAATTTCTTCTACCAGGAAGCATCAACCAAGCTAAACACCGAAGGCACCCAAAAGTCCCAAGATCTGAGACAGGGTGTCGATTGCGTTCGCCAGAGGGTTCAATCTGTTTTGGACAAACAGCTAGCTATTTGGGAAAAATACTGCCTTCATCACTGCTTTGCTCTTCCCCATGGTTTTCTTATGCCAAACACTGTACGTGATGAATCAAGTAAGAGTGGCATTGATCCATGTGCTCCTTCTGATCCAGATATAGATGCTCAGTTAGATTCATTGAGAAAAAAACTGACTGAGGTGGGGAAGGAATCTGAAATGCTGAATCAAGAAATTCAAGCATTAAAGAAGCAGTCTACTCCCAGTGTTAGGTATATCAATGAGGCAGTGCAATTATATGAGCAAAACTCTTCGCATGAGTTGTTTCAGGAGATTGTGAAAACCGCCTCAGAACTTGGAATGAAGATGGGAAAGCTAAACACCAGCATGATTGAAGAGTCTGAACAAATGAAAACGAAAAGGGTATATAGCACTGAAATTGATCTATCTGCTATAAATCCTACCAAAGGCCTCTCAAATGTGAAGTTAGAAGATCTTCAAGAATTTGTAACTATTATGAAGACCATAACTAAGGGATAA 747 0.4163 MAGTERSESEGVFDSLNLNPQLFVNEALNTVDDVLLEAFNFFYQEASTKLNTEGTQKSQDLRQGVDCVRQRVQSVLDKQLAIWEKYCLHHCFALPHGFLMPNTVRDESSKSGIDPCAPSDPDIDAQLDSLRKKLTEVGKESEMLNQEIQALKKQSTPSVRYINEAVQLYEQNSSHELFQEIVKTASELGMKMGKLNTSMIEESEQMKTKRVYSTEIDLSAINPTKGLSNVKLEDLQEFVTIMKTITKG. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01248 248 PANTHER PROTEIN MIS12 HOMOLOG 5 242 IPR008685 GO:0000278|GO:0000775|GO:0005634
Seca12g01248 248 Coils Coil 127 154 - -
Seca12g01248 248 Pfam Mis12 protein 14 145 IPR008685 GO:0000278|GO:0000775|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01248 Seca-Chr12 12223720 12229420 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01248 - - gmx:100306256 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01248 12 12223720 12229420 Seca12g01248 12 12223720 12229420 ECH