Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01247 ATGTTCCGCATAAGTAACACCCTTGTTGGTGCCCTTAACATACTCTCCCTACTCCTCGGTCTCGCCGCCGTGGGCACCTCCGCCTACATCCACATCCACCGCGGTGACGACGCCACCGACTGCCAGAAGGTGCTGCAGTACCCGCTCCTAATCGGCGGCGTCTTCGTCGTTCTCGTGTCAGCGCTGGGAATCGTTGGCTCCTTATGCCGCGTCAACACAGCACTCTACGCTTACCTGTTGGTGACGTTCATGGTGGTGGTGGGACTCGCCTTTTTCACCATCTTCGCAGTCTTCGTCACCAACAGAAAAGTCGGACAACACATATCCGGCAAAGGCTATGGGGAATACAGGGTCGCTGACTTCTCCCACTGGTTACAGCGTTACGTCGTCAACGACAAGAACTGGGACGAGGTCAAGAGTTGTTTGATGGATGCACATGTTTGTCAAAACCTCGCCCTCAACGGTGGTCGCAACAACGACTCCCTCATTTTCAAACACTTGTCTACCACGCAGTCCGGGTGCTGTAAGCCACCGGGGTATTGTGGATTTATAATGAAGAATGCTACGTTTTGGGAAGTGCCAAAGAGGGGTCTAGAATCGAATAATTCTGACTGTAGCAGATGGAACAATAGAGAGGAGAAACTGTGTTATGATTGCAATTCATGCAAAGGAGGAGTGTTGGCCAACATCAGGAACCAGTGGAAACATCTCACGATATTCAATGCGTGTGTTGTTGTAATTGTCACCGCCATATACGTCTTGGGTTGCTACGCCGTCAGGAACAACCGATCTGACTTGCGCTGCAAGCATCGCTCACGTGTACCTTGCCCTTGA 834 0.5168 MFRISNTLVGALNILSLLLGLAAVGTSAYIHIHRGDDATDCQKVLQYPLLIGGVFVVLVSALGIVGSLCRVNTALYAYLLVTFMVVVGLAFFTIFAVFVTNRKVGQHISGKGYGEYRVADFSHWLQRYVVNDKNWDEVKSCLMDAHVCQNLALNGGRNNDSLIFKHLSTTQSGCCKPPGYCGFIMKNATFWEVPKRGLESNNSDCSRWNNREEKLCYDCNSCKGGVLANIRNQWKHLTIFNACVVVIVTAIYVLGCYAVRNNRSDLRCKHRSRVPCP. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01247 277 Pfam Tetraspanin family 6 258 IPR018499 GO:0016020
Seca12g01247 277 PANTHER TETRASPANIN-8-RELATED 3 264 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01247 Seca-Chr12 12220060 12221408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01247 1 264 Miscellaneous Gene Families AT1G18520 44.981 2.35e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01247 - - gmx:100815322 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01247 12 12220060 12221408 Seca12g01247 12 12220060 12221408 ECH