Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01245 ATGGTCGCTCTTTCGCTTTCAACTCCCAATTTCTCCACCGCCTTCCTCGGCAAAAAATTGCCCCTCCGAGAAAATACGGGGAAGCTGACAAACTTTCCCGATGTTTCATTTCGCACAAGATGCGCGGTGGACACGCCCTATGGAGGTAATGTCCAAAAATTCCCTCGAATCAGTGTTTGGGATCCTTACCGACGCCTTGGTGTTGGCCATGATGCTTCTGAAGAAGAAATTTGGAGCTCCAGAAATTTTCTGTTGCAACAATATGCTGGACATGAGAGGAGTGAAGAATCAATAGAAGCTGCTTTTGAAAAAATATTGATGGCTAGTTTCATACAAAGGAAGAAAACAAAAATTAATTTAAAAAGCAGGCTGAAAAAGAAAGTAGAGGAGTCTCCACCATGGGTCAAGAACTTGCTAAACTTTGTTGAACTGCCACCAACTGAGATTATCCTCAGAAGATTGTTTCTCTTTGCCTTCATGGGTGGCTGGAGCATTATGAATTCTGCTGAAACTGGACCTGCTTTTCAGTGCATGAATAATTGCATGTTGATAGTACCATTCTTTTGCTACAGGTGGCAATCTCATTGGCAGCTTGCATATATTTCCTTAATGAAAAGACAAAGAGCTTGTCTAGAGCGTTCATCATTGGGTTTGGAGCTCTTGTGGGTGGATGGGTCTCTGGTTCATTGCTGGTACCCAATATTCCTTCTATGTTGCTGCGCCCAACTTGGTCACTTGAACTTTTGA 747 0.4297 MVALSLSTPNFSTAFLGKKLPLRENTGKLTNFPDVSFRTRCAVDTPYGGNVQKFPRISVWDPYRRLGVGHDASEEEIWSSRNFLLQQYAGHERSEESIEAAFEKILMASFIQRKKTKINLKSRLKKKVEESPPWVKNLLNFVELPPTEIILRRLFLFAFMGGWSIMNSAETGPAFQCMNNCMLIVPFFCYRWQSHWQLAYISLMKRQRACLERSSLGLELLWVDGSLVHCWYPIFLLCCCAQLGHLNF. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01245 248 PANTHER - 38 185 IPR021788 -
Seca12g01245 248 Pfam Protein CHAPERONE-LIKE PROTEIN OF POR1-like 70 203 IPR021788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01245 Seca-Chr12 12212750 12217221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01245 - - gmx:100806315 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01245 12 12212750 12217221 Seca12g01245 12 12212750 12217221 ECH