Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01230 ATGGCCCAAGATTCTGAGAAGAGGTTCCGTTCCGTCATGGACAAGCTCTTCCACTCTCCACCCAATCCTTCACCTTCTACCTCCAGTTCATCTGGAGTGCAACTATCAGTGGGTAAGAAACGTCCTTACCAGTCAATTGCATCAGGGAGAGGGGATGTTGGTGAGGGACAACAATCATCCTCAGCTGCTGCAGTAGACGCCCAAGGACAGCTCTGCCGACCATGGGATCGTGGTGACTTTATGAGGATATTAGCCACATTCAAATCTATGTCATGGTTTGCTAAACCTAAGATAATACTACGGAATGACAATAGGATTGATTACAAAACACTGGCAGAGATTTTGGAATTTTGGATTGTTAGAGTCAGTACAGGTGGTTGTATAGCGTTAGGCGATGGTGCGGTGAACAAAGATTGGAGGATCAAGGTCTTTCTTGGTGTGACAATGATGGTCACAATGGGTCTGGACGGAAACTATGGTGGAGCGGTGTTCTTGGATTGA 501 0.4651 MAQDSEKRFRSVMDKLFHSPPNPSPSTSSSSGVQLSVGKKRPYQSIASGRGDVGEGQQSSSAAAVDAQGQLCRPWDRGDFMRILATFKSMSWFAKPKIILRNDNRIDYKTLAEILEFWIVRVSTGGCIALGDGAVNKDWRIKVFLGVTMMVTMGLDGNYGGAVFLD. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01230 166 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 98 - -
Seca12g01230 166 MobiDBLite consensus disorder prediction 20 38 - -
Seca12g01230 166 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01230 Seca-Chr12 12072076 12076633 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01230 - - pvu:PHAVU_003G178600g 124.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01230 12 12072076 12076633 Seca12g01230 12 12072076 12076633 ECH