Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01224 ATGGCTGACGTTAACCCAACCTCAGCCCAAACTACAAGATCACCATCCTCCACCTCAGCGGCGTTTCTTCGAAGGCTTCAAGAGCACGCTCCTAACTCAACCCAACTCGCTGGTCTCTTAACCCTTCTGGTAACCGGAGCCATCTTGCTTCTCCTCACTGGCTTAACCGTCGCAGCAACCGTTTTGGCTATGATCTTCTTCTCGCCGTTGATCATAGTCTCGAGCCCAATATGGGTGCCAGCTGGCACCTTTCTGTTCCTCCTAACCGCAGGGTTCTTGTCCATGTGCGGATTCGGCGTCGTCCTCGTTGCTGTGTCGTCCTGGATGTACCGTTACTCAAGGGGTCTCCACCCACCCGGTTCGGACCGGGTCGATTATGCACGGAGCAGAATTTACGATACTGCCACTCATGTCAAAGACTATGCTAGAGAATACGGTGGATATTTGCAGAGTAAGGTGAAGGATGCAGCGCCAGGCGCTTGA 483 0.5342 MADVNPTSAQTTRSPSSTSAAFLRRLQEHAPNSTQLAGLLTLLVTGAILLLLTGLTVAATVLAMIFFSPLIIVSSPIWVPAGTFLFLLTAGFLSMCGFGVVLVAVSSWMYRYSRGLHPPGSDRVDYARSRIYDTATHVKDYAREYGGYLQSKVKDAAPGA. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01224 160 Pfam Oleosin 35 146 IPR000136 GO:0012511|GO:0016020
Seca12g01224 160 PANTHER OLEOSIN 28 155 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01224 Seca-Chr12 12020044 12020526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01224 5 160 Lipid Metabolism Gene Families AT3G18570 53.205 1.22e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01224 - - tpra:123921957 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01224 12 12020044 12020526 Seca12g01224 12 12020044 12020526 ECH