Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01008 ATGACAGGGAGATCAATGGCGCAAGGTGCACATGCCAATGCGACTCTCGTGCTTGCTCAGGAAAGAACTCGCCGGAAAGATATTTTTCACCATTTTCAGCGTTACAATGGTGGTTGGAATATCACCAATACTCACTACATTTCGTCAGTTCTTTCTACTGCAATTCCCTTCTTTGCTGTTGCTGCAGCCTGGTTCGTGATTTTTGGGATTATTTTACATCTCATCTGTGTCTCTTACTGCTGTTGTCCTGGAGAGACTTATGGCTACTCTAAATTAGCCTTTGCTTTCTCCTTGATATTCCTTATCCTCTGCACCATCGGGGCAATAGGTGGATGCATTGTCCTGTACACTAGTCAGGGGAAGTTTCATGGAAGCACCTCAAATACACTGGATTACATTGTGAGTCAGGCTGAATTCACTGCTGAAAACCTCAGGAACGTGTCAAATTATTTTGATACAGCTAAGCAGATTGTAATTGGAGTTGGTTTGCCATCAGATGTTGGAAAGGACATTGATAATGTTCAGACCAAAATCAGCACTGCTGCTGCTGATCTTTCCAAGAAGACTGAAGATAATTCCATGATGATACACCAAGGCATAGATGGAATGAGATTGGCTCTTATTATTGTTGCTGGTGTTATGCTCCTTGTTGCATTTCTCGGATTCTTATTTTCCATACTTGGGTTGCGGTGTCTTGTATACTTCTTGGTAGTTGTTGGATGGATTCTTGTTGCAGGCACCTTTATACTTTGTGGTGCATTTTTTTTCCTTCATAATGCAATTGGCGATACATGCGTTGCCATGGATGAGTGGGTTCTGAACCCCACTGCTCATACAGCCTTGGATGAAATTCTTCCTTGCGTGGATAATGCAATTGCCATGGAGACCTTTGCACGTAGCAAGACTGTGACATATTTACTTGTTCAATTAGTTGACGATTTCACCTCCACTGTCGCAAATGGAGATATCATAACTTACAACCAATCAGGCCCCCTCATGCCTCTTCTCTGCAATCCATTCAATAGCGATTACACAGATCGGCAGTGTGAAACTGGGGAAGTTGAATTGGAAAATGCTACCGAGGTATGGAAAAATTATACATGTCAGGTTTCTTCAACAGGCAATTGCACAAGTTATGGTCGAATGACCCCCTCCATATACACCCAACTTACAGCTGCAGTGAATGTGACCTATGGTTTACATCACTATGGCCCATTTCTGGTTGATTTAGTAGACTGCACTTTTGTCCGGAAGACATTCACAGACATTAGCAACAATCATTGTCCTGGTCTCCGGAGATATACTAAATGGATTTATTGGGGATCAGTTGTGATATCTGTAGCTGTAATGCTGTCCTTGGTGTTTTGGATCATCTATGAAAGAGAGCAGCGGCATCGTCTTCACATCAAACGGGCCATGGCCATATAA 1428 0.4272 MTGRSMAQGAHANATLVLAQERTRRKDIFHHFQRYNGGWNITNTHYISSVLSTAIPFFAVAAAWFVIFGIILHLICVSYCCCPGETYGYSKLAFAFSLIFLILCTIGAIGGCIVLYTSQGKFHGSTSNTLDYIVSQAEFTAENLRNVSNYFDTAKQIVIGVGLPSDVGKDIDNVQTKISTAAADLSKKTEDNSMMIHQGIDGMRLALIIVAGVMLLVAFLGFLFSILGLRCLVYFLVVVGWILVAGTFILCGAFFFLHNAIGDTCVAMDEWVLNPTAHTALDEILPCVDNAIAMETFARSKTVTYLLVQLVDDFTSTVANGDIITYNQSGPLMPLLCNPFNSDYTDRQCETGEVELENATEVWKNYTCQVSSTGNCTSYGRMTPSIYTQLTAAVNVTYGLHHYGPFLVDLVDCTFVRKTFTDISNNHCPGLRRYTKWIYWGSVVISVAVMLSLVFWIIYEREQRHRLHIKRAMAI. 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01008 475 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 12 464 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01008 Seca-Chr12 9620662 9624139 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01008 - - gmx:100809927 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01008 12 9620662 9624139 Seca4g12051 4 261369686 261372243 ECH
Seca12g01008 12 9620662 9624139 Seca12g01008 12 9620662 9624139 ECH