Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00663 ATGTCAGATAACGAAGACCATGCAGCAGCAGAGTTCACAAATGGCGAATCGCCTCCAAAGCTCAAACAGAGACTCAGAGATAGATCCAAGGAGATGCTGTCCAAACAAGCTGTTCAGACCAAACAAATGCTTTCCAAACAGGCCGTTAAGATTGCCAAACAAGCTGAAGAACACGAAAAGTTCATAAACAAGGTGACACATCTTTTGGGGGTCCTCGGCTTTGGTGGGTTCTGCTTCCTCTTGGGGGCAAGACCCCAAGACATTCCCTATGTATATTATTTGTTCTACTTCATCTTTGTTCCTCTTCGTTGGATATACTATAGGTTCAAGAAATGGCATTACTATCTATTGGATTTTTGCTACTATGCAAATACAATCTTCTTGGTTGATCTTCTTTTTTATCCAAGGAACGAAAAGCTTTTCATGGTTTGCTTTTCTTTTGCTGAGGGACCATTAGCATGGGCTTTGATTGTTTGGCGCTGCAGCTTGGTTTTCAATTCTGTTGACAAAATTGTCAGTGTTCTTATCCATCTTTTACCTGGATTGGTTTTCTTTACAATTCGGTGGTGGAATCCTGCAACCTTTGAAGCTATGCATCCAGAGGGAACTGCTCGAAGAGCTACATGGCCTTATGTTGAAGATAAATCCTATCTCTGGACATGGCTGTTTCTGGTACCCTTGGTAGCTTACTCTCTGTGGCAAGTTCTATACTTCCTCATTGTCAATGTCTTACGCCGACAAAGGCTTTTAAGAGATCCTGAAGTCATGACTTCCTACAGGGAACTCTCAAAAAAAGCTCAGAAAGCAAACAATATATGGTGGCGCTTAAGTGGGTTGCTTGGGGATCAAAATCGCAATCTAATGTACATTTTTCTTCAAGGCATATTTACCGTGGCAACCATGGCACTAACTGTCCCCATATTCTTGTCCTATGAATTGCATGTAGTTTTCCAAATACTCAAGGTTTCTGCGTCTGTATGGAATGGAGGAAGTTTTCTGTTAGAAGTAATGCCTAGGCAGGCAATTCTCAAGGAGAAAAAGAAATCAGAGATACAACCTGCTCAAGGTCAATTGGAAAATGGTAGCAAGTTCAACAATGCTGTGGGGACATCTGACTCCTGA 1122 0.418 MSDNEDHAAAEFTNGESPPKLKQRLRDRSKEMLSKQAVQTKQMLSKQAVKIAKQAEEHEKFINKVTHLLGVLGFGGFCFLLGARPQDIPYVYYLFYFIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLFYPRNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPATFEAMHPEGTARRATWPYVEDKSYLWTWLFLVPLVAYSLWQVLYFLIVNVLRRQRLLRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRNLMYIFLQGIFTVATMALTVPIFLSYELHVVFQILKVSASVWNGGSFLLEVMPRQAILKEKKKSEIQPAQGQLENGSKFNNAVGTSDS. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00663 373 MobiDBLite consensus disorder prediction 353 373 - -
Seca12g00663 373 Pfam Protein of unknown function (DUF2838) 64 173 IPR021261 -
Seca12g00663 373 MobiDBLite consensus disorder prediction 1 31 - -
Seca12g00663 373 PANTHER OS01G0585100 PROTEIN 24 358 IPR021261 -
Seca12g00663 373 MobiDBLite consensus disorder prediction 352 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00663 Seca-Chr12 5976534 5980488 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00663 - - gmx:100791853 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00663 12 5976534 5980488 Seca12g00663 12 5976534 5980488 ECH
Seca12g00663 12 5976534 5980488 Seca6g03738 6 104679729 104683426 PCT