Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00461 ATGACACTTGTCTCGCTCTTCCTCACCGCCACCAAGCTCGCCGGAGCTCTGGTCACCCTCACCGTCGCCGCCAATGCCTTCTCTTTCTCTCGTTTCCGCAACAAGAATCTTCGCCCTTTCCGCTCCCCTATCGACGAATCCTCCGACACTCTCGCCCTTTTCGACGTAACCGCCGAAGGAGAAAATGGATTTTTCTTTGGTCTGGCTACAGCACCAGCACATGTTGAGGACAAGCTTGATGATGCTTGGATACAGTTTGCTGAACAGAAGAGTGGTGGTGCTGAGGTCAAGCAGGAAGTGGATGCTTTGATGGGCTCTGCTGCTGGTGACGGTGGGTCTCACCAAGCTGCAGCATTTCCACAACATGCTCATAAACAAGCTAACAAGGGAAAGAAGCCTCTTAAGGTCGCTATGGAGGCCATGATTAGAGGATTTGAGAAGTACATGGAAGTAGAGGGCCAAGAAGAAGAAGAAGAAGAAGAACATCCAAATGTAACTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGGTTTTGGTCTGATCCTGATACAGAACTAAAGTTGGCCAAGGAGACTGGTGTTACTGTTTTTCGCATGGGAATAGATTGGACAAGAATAATGCCAGAGGAGCCAGTAAACAGCCTTAAAGAATCTGTTAACTATGCTGCATTGGAGCGTTATAAGTGGATTATCAATAGGGTTCGATCATATGGAATGAAGGTGATGCTCACTCTATTTCATCACTCACTTCCTCCCTGGGCTGGTGAGTATGGAGGTTGGAAGATGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTATCAGATTTAGTAGACTATTGGGTAACATTTAATGAGCCCCACGTCTTCTGTATGCTTACTTATTGCGCTGGAGCTTGGCCTGGTGGTAATCCTGATATGCTGGAGGCTGCTACTTCTGCACTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATTGCTCACTCTAAGGCATATGATTACATCCATGAATTAAGTAACTCATTAAATCCAATAGTTGGTGTAGCACATCATGTGTCATTTATGCGACCCTATGGTCTGTTTGATGTTGCTGCTGTTACACTGGCTAATTCATTGACTATATTCCCATACATTGATGCAATATCTGACAAGCTGGACTTTATAGGCATAAACTACTATGGGCAGGTTTGCTTTATTAACCTTGATAATGTGCTTTATATGATATCTGGCATTTACTCATATGACAATTCTGACATTTACTTCAGGAAGTAG 1305 0.4483 MTLVSLFLTATKLAGALVTLTVAANAFSFSRFRNKNLRPFRSPIDESSDTLALFDVTAEGENGFFFGLATAPAHVEDKLDDAWIQFAEQKSGGAEVKQEVDALMGSAAGDGGSHQAAAFPQHAHKQANKGKKPLKVAMEAMIRGFEKYMEVEGQEEEEEEEHPNVTAWHNVPRPEERLRFWSDPDTELKLAKETGVTVFRMGIDWTRIMPEEPVNSLKESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGEYGGWKMEKTVDYFMDFTRLVVNSVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGNPDMLEAATSALPTGVFQQAMHWMSIAHSKAYDYIHELSNSLNPIVGVAHHVSFMRPYGLFDVAAVTLANSLTIFPYIDAISDKLDFIGINYYGQVCFINLDNVLYMISGIYSYDNSDIYFRK. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00461 434 PANTHER GLYCOSYL HYDROLASE 139 384 IPR001360 GO:0004553|GO:0005975
Seca12g00461 434 SUPERFAMILY (Trans)glycosidases 165 423 IPR017853 -
Seca12g00461 434 Gene3D Glycosidases 138 429 - -
Seca12g00461 434 Pfam Glycosyl hydrolase family 1 185 369 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00461 Seca-Chr12 4002846 4009814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00461 4 407 Glycoside Hydrolase AT3G06510 60.934 3.49e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00461 K21362 - gmx:100792401 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00461 12 4002846 4009814 Seca12g00461 12 4002846 4009814 ECH