Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00458 ATGCATATCTTCAGTCCTGTAACTCCCGGTCAGGTATCGTTCTTGCTCGGGATCATTCCAGTCATTGTGGCATGGATATATTCGGAGATATTGGAGTATCGGAAAAATTCTGTCCCGTCCAAAGTGCACTCGGACATCAACTTAGTTGAAATGGGCAATGATGTTGTTAAAGACGAAGACACAGCAGTTTTATTAGAGGGAGGAGCTCAACAGCCAGTATCCCCTAGAGCTCGAAGCATAACTGCCTCATCATCAATTTTCCGATTCCTTTTGATGGATGAATATTTCCTTCTTGAAAACCGTTTGACACTTAGAGCCATGTCTGAATTTGGTCTTCTTTTGGCTTACTATTATTTGTGTGACCGTACGGATTTCTTTGGCTCATCAAAAAAGAGTTACAATAGGGATCTCTTCCTATTTCTCTATTTTCTCCTTATCATAGTTTCAGCAATGACTTCCTTTAAGATACATCAGGACAAGTCACCATTTTCTGGGAAATCCATACTTTACTTAAATAGGCACCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTGATGTACCACTATTTTGCTGCATCAGAAATATACAATGCAATCCGTTTGTTCATTGCTGCATACGTTTGGATGACTGGATTTGGGAACTTCTCATATTATTATGTTCGTAAAGATTTTAGTCTAGCAAGATTTGCTCAGATGATGTGGCGACTTAATTTCTTGGTATTGTTCTGTTGTATTGTACTTAACAACAATTACATGTTGTACTACATCTGCCCCATGCACACTCTTTTCACTCTTATGGTTTACGGGGCACTTGGTATTCTCAACAAGTACAATGAGATTGGGTCAGTCATTGCTGTAAAATTCCTTGCTTGCTTCTTGGTTGTTATCTTGGTATGGGAGATACCTGGAGTCTTTGAATGGGTTTGGAGTCCATTTACTTTCCTACTCGGTTATACTGATCCTTCCAAACCAAAATTGCCCCTCTTGCATGAATGGCATTTTCGCTCAGGGCTTGATCGCTACATATGGATAATTGGAATGATTTATGCTTATTATCATCCAACTGTTGAGCGATGGATGGAGAAATTGGAGGAAACAGAAATCAAGCGCAGAATATCAATCAAAGCTGCTGTCGTGCTGATATCTTCTGTGGTGGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAGCTTACATACAATAAATACCATCCTTATACCTCGTGGATTCCAATAACGGTTTACATATGCTTGCGGAATGTTACACAAAGCTTCCGTAGCTATACATTGACCCTTTTTGCATGGCTTGGGAAGATTACACTGGAGACTTACATCTCCCAGATCCACATCTGGTTAAGGTCAGGTGTTCCAGATGGTCAACCCAAATTGTTGCTTTCCCTGATCCCAGAGTACCCAATGTTGAACTTCATGCTTACTACTTCCATATATGTTGCGATTTCTTATAGGCTCTTTGACCTGACCAATACACTAAAAATAGCATTTGTGCCCAGTAAAGATAACAAGCGTCTTACATACAACTTAATTACAGCAACAACAATATCAGTTATTTTATATTCTTTGTCCTTTGCCTTCCTCAGGATACCTCAAATGCTGGTAAGTGTTATTACACTAACTTGA 1650 0.3945 MHIFSPVTPGQVSFLLGIIPVIVAWIYSEILEYRKNSVPSKVHSDINLVEMGNDVVKDEDTAVLLEGGAQQPVSPRARSITASSSIFRFLLMDEYFLLENRLTLRAMSEFGLLLAYYYLCDRTDFFGSSKKSYNRDLFLFLYFLLIIVSAMTSFKIHQDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFLVLFCCIVLNNNYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAVKFLACFLVVILVWEIPGVFEWVWSPFTFLLGYTDPSKPKLPLLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEETEIKRRISIKAAVVLISSVVGYLWFEHIYKLDKLTYNKYHPYTSWIPITVYICLRNVTQSFRSYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPEYPMLNFMLTTSIYVAISYRLFDLTNTLKIAFVPSKDNKRLTYNLITATTISVILYSLSFAFLRIPQMLVSVITLT. 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00458 549 Pfam 10 TM Acyl Transferase domain found in Cas1p 103 513 IPR012419 -
Seca12g00458 549 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00458 Seca-Chr12 3985453 3991490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00458 K03377 - gmx:100794337 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00458 12 3985453 3991490 Seca12g00458 12 3985453 3991490 ECH