Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00451 ATGGACGCTGATAAAAGTTCGAAGAACGTGAACCTTGACGATGTGCCCATGCAAATGGATTCCAGTGACTCTTCAAGCGCTCAATTGAAGGCAAAAGACAAAGGAAAGGAGGAGCTCACAGAGAGTATGAGCAAACTGCATATTGAGGGATCATCGTCTGGGAATGGATCACCAAACTTCAAAAGAAAACCAGTTATCATCATAGTTGTAGGAATGGCAGGGAGTGGGAAAACAACACTCCTCCACAGGTTGGTTTGCCATACACACATGTCAAACATTCGGGGTTATGTGATGAATCTTGATCCGGCTGTCATGACACTCCCATATGCTGCTAACATTGATATAAGAGACACTGTTAAGTACAAAGAAGTCATGAAGCAATTCAACCTTGGCCCTAATGGTGGAATTTTGACTTCCCTTAACTTGTTTGCCACCAAGTTTGATGAGGTAATTTCTGTTATTGAAAAGCGAGCAGATCAACTTGACTATGTTCTTGTGGATACCCCTGGTCAGATTGAGATATTCACCTGGTCTGCTTCCGGTGCTATCATCACAGAAGCTTTTGCCTCCACATTTCCTACTGTGGTCACCTATGTAGTTGATACACCTCGTTCAGAAAATCCCACCACTTTCATGAGCAACATGCTTTATGCTTGTAGTATCCTGTATAAGACAAGGTTACCTCTAATCTTGGCATTCAACAAGGTTGATGTAGCACAACATCAATTTGCTTTGGAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGCAAGTTCAGATCACTCATACACGTCAACGTTAACTCAGAGCCTTTCTCTTGTGCTAGATGAGTTCTACAAAAACTTAAGATCAGCTGGAGTTTCTGCAGTTTCTGGTGCAGGAATTGAAGCCTTCTTCAAGACTGTTGAAGCTAGTGCAGAAGAATACATGGAAAACTATAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCAGCGATTGGAGGAAGACCGCAGGAGGGAGAACATGGATAAACTGAGGAAGGATATGGAGAAATCTGGGGGAGAAACTGTAGTCTTGAGCACTGGTTTAAAAGGCAAAGAAACTAGTAAAGGTAAAAGCATGATGGATGAGGAAGATGAGGTTGAAGAGGATGAGGAGATGGATGATGATGATGATGATGATTTGGGGATATATACTGAAGAGGAGGATGCTATAGATGAGGACGGAGATGAAGAGGTTGATAGATTTGCCTTCTGA 1242 0.4259 MDADKSSKNVNLDDVPMQMDSSDSSSAQLKAKDKGKEELTESMSKLHIEGSSSGNGSPNFKRKPVIIIVVGMAGSGKTTLLHRLVCHTHMSNIRGYVMNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSENPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFALEWMEDFEAFQAAASSDHSYTSTLTQSLSLVLDEFYKNLRSAGVSAVSGAGIEAFFKTVEASAEEYMENYKADLDKRREEKQRLEEDRRRENMDKLRKDMEKSGGETVVLSTGLKGKETSKGKSMMDEEDEVEEDEEMDDDDDDDLGIYTEEEDAIDEDGDEEVDRFAF. 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00451 413 FunFam GPN-loop GTPase 1 64 322 - -
Seca12g00451 413 MobiDBLite consensus disorder prediction 323 413 - -
Seca12g00451 413 MobiDBLite consensus disorder prediction 11 26 - -
Seca12g00451 413 PANTHER XPA-BINDING PROTEIN 1-RELATED 68 326 IPR004130 -
Seca12g00451 413 MobiDBLite consensus disorder prediction 372 413 - -
Seca12g00451 413 CDD GPN1 65 305 IPR030230 GO:0003924
Seca12g00451 413 Gene3D - 64 322 IPR027417 -
Seca12g00451 413 MobiDBLite consensus disorder prediction 1 41 - -
Seca12g00451 413 MobiDBLite consensus disorder prediction 323 348 - -
Seca12g00451 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 304 IPR027417 -
Seca12g00451 413 MobiDBLite consensus disorder prediction 27 41 - -
Seca12g00451 413 Coils Coil 311 338 - -
Seca12g00451 413 Pfam Conserved hypothetical ATP binding protein 69 307 IPR004130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00451 Seca-Chr12 3928761 3934170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00451 K24104 - gmx:100805534 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00451 12 3928761 3934170 Seca12g00451 12 3928761 3934170 ECH