Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00429 ATGGATCGGTTGTCGCCGGAGAAGCTGATACTCGTCAACCGCGAGCCAAACGGCGTCGCGCTGGTGACGATTCACCGTCCCGGATCTCTAAACTCTCTGACCCGCCCGATGATGGTGGACCTGGCTCAGGCTTTCAAGAGCCTTGACCGGGACGAGTCGGTTCGTGTAATCATATTAACAGGGTCGGGTCGGTCATTCTGTTCAGGCGTGGACCTTACGGCGGCGGAGGATGTTTTCAAGGGCGATGTGAAGGACCCGGAGAGTGACCCGGTCGTGCAAATGGAGCTGTGCCGCAAACCGATAATCGGAGCCATCAAAGGATTTGCCGTCACTGCTGGATTCGAAATTGCCCTCGCCTGTGACATCTTGATCGCTGCCAAAGGATCTAAATTCATGGACACTCATGCTAGGTTTGGGATATTTCCTTCTTGGGGTTTGTCTCAAAAGCTTTCACGTATTATAGGGGCCAATAAAGCCCGTGAGGTATCTCTCACAGCCACGCCTTTAACTGCAGAGGTAGCTGAAAAGTTGGGATTTGTAAACCATGTTGTTGAAGAGGGTGAGCTATTGAAGAAAAGCAGAGAAATTGCAGAAGCCATTGTGAAAAATAATCAAGACTTGGTGTTAAGATACAAGTCAGTCATAAATGATGGTCTCAAGCTTGATCTTGGGCGTGCTCTTTCCCTTGAAAAGGTGAGTATTGTAACATTTGTGTCAAAAATTACATAA 729 0.487 MDRLSPEKLILVNREPNGVALVTIHRPGSLNSLTRPMMVDLAQAFKSLDRDESVRVIILTGSGRSFCSGVDLTAAEDVFKGDVKDPESDPVVQMELCRKPIIGAIKGFAVTAGFEIALACDILIAAKGSKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLTATPLTAEVAEKLGFVNHVVEEGELLKKSREIAEAIVKNNQDLVLRYKSVINDGLKLDLGRALSLEKVSIVTFVSKIT. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00429 242 PANTHER ENOYL-COA HYDRATASE 7 238 - -
Seca12g00429 242 FunFam probable enoyl-CoA hydratase 1, peroxisomal 7 237 - -
Seca12g00429 242 Pfam Enoyl-CoA hydratase/isomerase 15 235 IPR001753 -
Seca12g00429 242 SUPERFAMILY ClpP/crotonase 8 234 IPR029045 -
Seca12g00429 242 CDD crotonase-like 10 200 - -
Seca12g00429 242 Gene3D - 5 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00429 Seca-Chr12 3718604 3720405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00429 18 216 Acyl Lipid Metabolism Gene Families AT1G60550 35.122 3.04e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00429 K01692 - gmx:100170725 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00429 12 3718604 3720405 Seca12g00429 12 3718604 3720405 ECH