Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00419 ATGGAGGGAGGTTCCGCCATAGACGTAGATAATCGCCAAGAGATGGAGGAGGAAGATCCTTTCCTCAGATTTGTCGAGTACGCCAGATCCGAGCTATTGTCACTGGAAGATGATCCAAACGGAGACGGTTCGCGTACCGCTGAATGTGGTTGGAGCTGGATCGTATCTCGTATTCTCAAGACTTGCATTGCTTATTCAAGTGGTGTCACACCTGCGATCTTGCTCTCTGAACTCTCTCAGGCATGGATTGGACAACGCAGGGTTGGCGCTCCGAAGAAGAGGCATGAAGTGATTAACCATCTCAAGAAGAATCATCGCAGGACAAAGCTTCCAAATACTGTTACCATTGATTCAATATGCAAGAAAAATTTCCTGTCCTTGAACAGTGTTCTGGAAGCTGTTATTATCGATGCATTTGTACTCCCAGGCACAAACATCCACATGCTTACATTGGGAGATTATTGGAGCACCAATGTCATAGATCTCTATCTTCACCGCAGATTCTATGACTTGGCAGGCCTGCAGAATGGAATTCTGAAAAAAGGGAGGGAGGTTTTCCTCACCGGTTGCTACCTCCGAACTGCCACTGAAGGCTCTGGTCATCCACGTCTTTTGCCAACTGAATATCTTGTGATTCTATTGGATGAGGATCAGGATGATGATGCAATGCTACTAGGAGCTCAGTTTTGTTCAGACTCTTTCTCTTCAATTTCTCTTGATGCAGTGAACAAAGGGGCTTCTTATTCACTTTATGCGAGAATTGAAAGCATTGAATCTGCGGAAATTCAAGGGAGCTTTGGAATGTTACAAAGAAAACAGATTACTCTTGTTGATGGTGATGGTGTCGCTTTAAAGTTCTTATTGTGGGGTGAGCAGACTATCCTTGCCAATCTTTTCAGTGTGGGAAGCATGCTTGCACTTGACAAACCATATGTTGCAAGTTCTGTAGAGTGTGATATTGAAACAACTGGGGAATTTTATCTTGAATATGGAAGTGCAACACAACTATATTTGGTGCCTTATATTCAACATGAGGAACAGGTGTGCGTAACATTGACACCAAATAGCCACCCTAGTCAGGGACTCAGGTTTTCTCAAGTGAGCTTGCCCTGTGATTCTCAGGGGACCATTGATTTCAGTAATTACCCTTTTCGGTCATTGGTGGTCGACCTTCGCAACAAGATGACTGGTATCAGCCTATATGGTGTTGTTACGGATATTATCAAAGAAGATAATAACCAAGAAACTATTTTTTCTTTAAGAATTGCAGATACTAGCGGAGAAATTCAGGCAAAGCTTCATTTTGCCACATTTTGGTCATTGGGAAGAGTGAGTCTCGGTCACACTGTATTTATATCTGGCTTGACATGCACCCCGTCAAAACAAAAGCGGTGA 1395 0.4337 MEGGSAIDVDNRQEMEEEDPFLRFVEYARSELLSLEDDPNGDGSRTAECGWSWIVSRILKTCIAYSSGVTPAILLSELSQAWIGQRRVGAPKKRHEVINHLKKNHRRTKLPNTVTIDSICKKNFLSLNSVLEAVIIDAFVLPGTNIHMLTLGDYWSTNVIDLYLHRRFYDLAGLQNGILKKGREVFLTGCYLRTATEGSGHPRLLPTEYLVILLDEDQDDDAMLLGAQFCSDSFSSISLDAVNKGASYSLYARIESIESAEIQGSFGMLQRKQITLVDGDGVALKFLLWGEQTILANLFSVGSMLALDKPYVASSVECDIETTGEFYLEYGSATQLYLVPYIQHEEQVCVTLTPNSHPSQGLRFSQVSLPCDSQGTIDFSNYPFRSLVVDLRNKMTGISLYGVVTDIIKEDNNQETIFSLRIADTSGEIQAKLHFATFWSLGRVSLGHTVFISGLTCTPSKQKR. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00419 464 Pfam Cell division control protein 24, OB domain 1 21 145 IPR035201 -
Seca12g00419 464 PANTHER NUCLEIC ACID-BINDING PROTEINS SUPERFAMILY 20 461 - -
Seca12g00419 464 Pfam Cell division control protein 24, OB domain 3 390 463 IPR035203 -
Seca12g00419 464 Pfam Cell division control protein 24, OB domain 2 150 279 IPR035200 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00419 Seca-Chr12 3621900 3625995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00419 - - gmx:100807658 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00419 12 3621900 3625995 Seca12g00419 12 3621900 3625995 ECH