Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00412 ATGGAGGAGAAGGCAAAAGCTGAGGAGAAGAAGATCGGTATGATTGAGGCTTGGTTGAGGAAGCACCGTCTTCAATACGACGGAGCCACCAGACACCCTTTTATTCTTACCATTCGTGATGGCACCGTCCACACTGATTCCTTCAAAACATGGCTCTCACAAGATTACTTGTTCGTCCGAGCCTTCGTCCCATTTGTAGCCAGTGTTCTGATAAAAGCTTGGAAGGAATCAGATGATAGTGCTGACATGGAAGTCATTTTGGGGGGCATGGCTTCTCTAGAGGATGAAATTTCATGGTTCAAGAGAGAAGCCAACAAATGGGGCATTCCACTTTCTGATGTTGTTCCTCAACAGGCAAACATAAACTATTGTGGGTTTATGGAAAGTTTAATGAGACCAGACGTGGAATATACTGTGGCTATTACAGCCTTTTGGGCCATTGAGGCAGTGTATCAAGAAAGCTTTGCCCACTGTATTGGAGAAGGCTCTAAAACCCCACCAGAACTGAAGGAGACTTGTGCAAGATGGGGCAATGAGGGGTTTGGTCAGTATTGTCAATCTCTGCAAAAGATTGCCAATCGGCGCTTGCAAAAGGCTTCTGACGATGAAATAAAAAAGGCTGAAGTTGTGTTGCTGAGTGTTCTTGAGCATGAAATTGAGTTTTGGAACATGAGCCGTGGAAATGTATGA 690 0.4478 MEEKAKAEEKKIGMIEAWLRKHRLQYDGATRHPFILTIRDGTVHTDSFKTWLSQDYLFVRAFVPFVASVLIKAWKESDDSADMEVILGGMASLEDEISWFKREANKWGIPLSDVVPQQANINYCGFMESLMRPDVEYTVAITAFWAIEAVYQESFAHCIGEGSKTPPELKETCARWGNEGFGQYCQSLQKIANRRLQKASDDEIKKAEVVLLSVLEHEIEFWNMSRGNV. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00412 229 SUPERFAMILY Heme oxygenase-like 29 225 IPR016084 -
Seca12g00412 229 Gene3D - 9 227 IPR016084 -
Seca12g00412 229 Pfam TENA/THI-4/PQQC family 20 227 IPR004305 -
Seca12g00412 229 CDD TenA_E_At3g16990-like 15 224 - -
Seca12g00412 229 FunFam Bifunctional TENA-E protein 10 227 - -
Seca12g00412 229 PANTHER BIFUNCTIONAL TH2 PROTEIN 3 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00412 Seca-Chr12 3587840 3589161 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00412 K20896 - gmx:547557 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00412 12 3587840 3589161 Seca12g00412 12 3587840 3589161 ECH