Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00398 ATGACGCGGGACATAGACGAGTTGCCGAAGAACGCGGCGAACTACACAGCGTTGACGCCGTTGTGGTTCTTAGAAAGAGCATCTCAGGTCCATCCTAACAGAAAATCGGTTATCCATGGATACCGTCACTACACTTGGCTACATACTTATCACCGTTGCCGTCGATTCGCCTCCGCTCTTTCTAACCATTCCATCGGTCTCGGAAACACAGTAGCTGTTATTGCTCCCAACGTTCCAGCTCTTTATGAAGCTCATTTTGGGATTCCAATGGCAGGGGCTGTGTTGAATCCTGTTAATATTAGACTAAATGCATCCACAGTAGCTTTCCTTCTTGGTCATTGCACAGCAGCAGCTGTAATCGTCGATCAAGAGTTCTTTTCATTGGCAGAAGAAGCTTTGAAAATATGGTCTGAGAAAACCAAAACCTTCAAGCCTCCAATTTTAATTGTCATTGGTGATGAAAATTGTGACCCTAAGGCACTTAGATATGCTTTGGGCAAAGGAGCCATTGAATATGAGGACTTTCTTCAAAGTGGTGACCCTGAATATGCATGGAAACCCCCAGAGGATGAGTGGCAGAGCATTGCTTTGGGTTACACGTCTGGTACCACTGCTAGTCCAAAGGGAGTGGTATTACATCACCGTGGAGCTTATCTCATGTCTCTAAGTGGAGCTCTTATTTGGGGAATGACTGAAGGAGCTATATATCTTTGGACGCTACCCATGTTTCATTGCAATGGTTGGTCCTACACTTGGACACTTGCAGCTCTCTGTGGCACAAACATTTGCCTTCGCCAGGTAACACCCAGGGCAGTTTATGAAGCCATTGCCAAGTACAAAGTGACTCATTTTTGTGCAGCACCAGTGGTGCTTAACTCAATAATTAATGCCCCAGCTGAGGAAACCATACTTCCTCTACCCCATGTTGTACATGTGAATACAGCTGGGGCAGCTCCTCCTCCTTCTGTTCTCTCTGGCATGTCTCAACGAGGATTTCGTGTCACACACACTTATGGTCTCTCAGAAACCTATGGCCCCTCTGTTTATTGTGCCTGGAAGCCAGAGTGGGACTCACTTCCCCCTGAAACCCAAGCCCGGCACCATGCAAGACAAGGGGTTCGGTACATTAGCTTGGAAGGCCTAGATGTTGTGAACACAAAAACCATGCAACCTGTTCCTGCAGATGGTAAAACTGTTGGTGAGATTGTGATGCGGGGTAATGTTGTGATGAAAGGCTACTTAAAGAACCCTAAAGCTAATAAAGAGACCTTTGCAAATGGATGGTTTCATTCTGAGGATCTTGCTGTAAAGCATCCAGATGGATATATTGAAATTAAAGACAGATCAAAGGACATCATCATCTCTGGTGCTGAAAATATCAGCAGCGTAGAGATAGAGAATACTCTGTACTCTCATCCTGCAATACTGGAGACATCAGTGGTTGCAAGGCCAGATGAGAAATGGGGCGAGTCTCCCTGTGCATTTGTGACATTAAAGCCAGGAGTGGATAACAGCAATGAGCAGCGTCTTGCTGAGGATATACTTAAGTTCTGCAGGGCCAAAATGCCTGCTTATTGGGTCCCAAAATCAGTTGTCTTTGGACCGTTACCTAAGACAGCTACTGGTAAGATACAGAAGCATTTGCTGAGGGCCAAGGCAAAAGAGATGGGTCCTGTCAAGATGAGCAAGTTGTAA 1695 0.4584 MTRDIDELPKNAANYTALTPLWFLERASQVHPNRKSVIHGYRHYTWLHTYHRCRRFASALSNHSIGLGNTVAVIAPNVPALYEAHFGIPMAGAVLNPVNIRLNASTVAFLLGHCTAAAVIVDQEFFSLAEEALKIWSEKTKTFKPPILIVIGDENCDPKALRYALGKGAIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAIYLWTLPMFHCNGWSYTWTLAALCGTNICLRQVTPRAVYEAIAKYKVTHFCAAPVVLNSIINAPAEETILPLPHVVHVNTAGAAPPPSVLSGMSQRGFRVTHTYGLSETYGPSVYCAWKPEWDSLPPETQARHHARQGVRYISLEGLDVVNTKTMQPVPADGKTVGEIVMRGNVVMKGYLKNPKANKETFANGWFHSEDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILETSVVARPDEKWGESPCAFVTLKPGVDNSNEQRLAEDILKFCRAKMPAYWVPKSVVFGPLPKTATGKIQKHLLRAKAKEMGPVKMSKL. 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00398 564 PANTHER ACYL-ACTIVATING ENZYME 9 559 - -
Seca12g00398 564 Gene3D - 451 558 IPR045851 -
Seca12g00398 564 FunFam Long-chain-fatty-acid--CoA ligase FadD 5 450 - -
Seca12g00398 564 Gene3D - 4 450 IPR042099 -
Seca12g00398 564 Pfam AMP-binding enzyme C-terminal domain 464 543 IPR025110 -
Seca12g00398 564 FunFam 2,3-dihydroxybenzoate-AMP ligase 450 557 - -
Seca12g00398 564 SUPERFAMILY Acetyl-CoA synthetase-like 12 555 - -
Seca12g00398 564 CDD ttLC_FACS_AEE21_like 15 551 - -
Seca12g00398 564 Pfam AMP-binding enzyme 25 455 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00398 Seca-Chr12 3461211 3464575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00398 3 564 Miscellaneous Gene Families AT3G16910 74.956 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00398 K01913 - gmx:100808187 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00398 12 3461211 3464575 Seca12g00398 12 3461211 3464575 ECH