Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00397 ATGGAGCACCAATCTTCAGTATCCGTAGCACTGATAGTTGGAGTCACAGGGATGGCTGGCCTAAGCCTCGCCGAAGCTTTGAAGCAACCCAATTGTCTCGGAGGCCCTTGGAAAGTTTACGGCGCCGCGCGGCGCCCCCCGTCCAGCTGGTTCCCTCCTTCCACCGTCGACCACTTCATTACCTTCGACGCCACTGACTCAGCCGACACACGCGTCAAGCTCATCCCCATAGCAAACGAGATAACCCACCTCTTCTGGGTCACCTTTCAGTTTGCCGTCAGAGACGAAGAAATCAACATCACCATCAACAAAGCCATGCTACAAAATGTTCTCACAGTCCTCAAGTCTTCCCCGTCTTCCCGGCTCACCCACGTAACGCTTCAAACCGGCACCAAACACTACATGGGTCCCATCAATGACCCGGTTCGGTCCACCCAACTCAACCGCCACGAGCCACCGTTCCACGAGAACATGCCAAGACTTCCTTACCCAAACTTCTACTACGCGCTGGAGGATCTCGTTGCATCCTACGCGCCCTCGCTCACATACTCTGTGCACCGCTCCTCCATTATAATAGGCGCGTCTCTAAGGAGTGCACACAACGCGCTGATGTCATTGGCTACGTATGCCGCTATTTGCCGCCACATAGGGATGCCGTTTCGGTACCCGGGGAGCAGGTACACGTGGGAGCATTTCTGCGACATGACAGACGCGCGCGTGCTGGCCAAGCAACACGTGTGGGCATCGGTGACGGACAGTGCCAAGAATCAGGCCTTTAATTGCACAAACGGCGACGTTTTTACGTGGAAGAGCATGTGGAGGTTACTGTGTGAATTGTTCGATATGGAGTTTGTGCCGTTGGATGAGAGGCAAGGGTTTGATTTGGTGGAATTGATGCGTGATAAGGGTGAGGTTTGGGACCAGATTGTGGAGAAATATGGGCTTCACAAAACCAAATTGGAGGAAATTGCGTGCTATGATATCCTCACGCCAGTGCTGCGGTTTGATTTTCAGCATGTGTCTAGTATGAACAAGAGTAGGGAATATGGATTTTTTGGGCACGTAGACACGTTTAAGAGTATCAGATTCTGGGTGGCTAAGCTGAAACAGATGAAACTCATACCCTCCTACGAACACTGA 1140 0.5228 MEHQSSVSVALIVGVTGMAGLSLAEALKQPNCLGGPWKVYGAARRPPSSWFPPSTVDHFITFDATDSADTRVKLIPIANEITHLFWVTFQFAVRDEEINITINKAMLQNVLTVLKSSPSSRLTHVTLQTGTKHYMGPINDPVRSTQLNRHEPPFHENMPRLPYPNFYYALEDLVASYAPSLTYSVHRSSIIIGASLRSAHNALMSLATYAAICRHIGMPFRYPGSRYTWEHFCDMTDARVLAKQHVWASVTDSAKNQAFNCTNGDVFTWKSMWRLLCELFDMEFVPLDERQGFDLVELMRDKGEVWDQIVEKYGLHKTKLEEIACYDILTPVLRFDFQHVSSMNKSREYGFFGHVDTFKSIRFWVAKLKQMKLIPSYEH. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00397 379 CDD 5beta-POR_like_SDR_a 9 314 - -
Seca12g00397 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 286 IPR036291 -
Seca12g00397 379 Gene3D - 7 375 - -
Seca12g00397 379 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Seca12g00397 379 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 2 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00397 Seca-Chr12 3459670 3460809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00397 - - gmx:100812240 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00397 12 3459670 3460809 Seca12g00397 12 3459670 3460809 ECH