Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00381 ATGTCGGCCACCGGTGGAGCTGCCATCGCTGGCGGAAGCCGCAGCCGTAATCGGCATCTAGGCGAGAACCGTTTCTACAGTCCGCCACCGTTGCGGAAACACAGAGAAAAGCAGGAACAGCAGCAGCAGCAACAGAGGTCTTCGCTTTCAAGAACTTCTTCGGAGAACAGACCTGGTTCCTCTTCCGATTGCTCGATTTCTTCGCGCGCCACATCTGACATGTCCAATTTGGATCGATTCTTGGAGTACATCACGCCCCATGTTCCCGCCCACTATCCTCCCAAGACAGGGTCGAGGAGATGGAAAACGAGGCATCCATACTTTGTACTTGGGGACTTGTGGGAATCTTTTAAGGAGTGGAGTGCATATGGGGCAGGTGTTCCTCTGGTGTTGAATGGGAATGAATCCGTTACACAGTATTACAATGTCTCCTTGTCTGCCATTCAACTGTATATTGATCCGTCGAAACCTTCCACTCGGTTAAGGAAATCCAGTCAAGAAAGTGACTCTGAATCAGCTAGAGAGACAAGCAGTGACAGCAGCAGTGGCTATTGTCATGAAAGAGGAGCAAAGAGTGTTCATGGCAGTAGGAATCATCCTAATGTTTTGGATGCAAGCAATCATGTTTTGGAAAGGGTCTCACTAAGTAATCCTTTCATGGGTTCATTGAATGATGAGACTGAGAGCTGCAACCCACCTGGTCAGCTTATATTTGAGTATTTTGAGCATGATACACCTTACAATCGTGAGCCATTAGCAGATAAGGCAAGATGTTATCCTTGGGTTGACTTGCACATTGAAATTATTTCTGATCTTGCGCGTCAATTTCCGGAGTTGAAGACATACTGGAGCTGTGATCTTTCACCTGCAAGTTGGGTTTCAATTGCATGGTATCCCATATATAGAATACCTACTGGTCCAACACTACAGAGCCTGAGTGCCTGCTTCCTGACCTTCCATTCCCTGTCTACAGCTTTACAGAGTTCAAATACTGATGGGCTAAATATTCATTATTCAAGAGGTAGGGACATGTCATCCAAGCTATCTTTACCAATCTTTGGGCTTGCCTGTCACAAGTTAAAAGTTTCTGTCTGGGATCCTGATGGAGTTTCTGAATGTCAGAAAGCCAATTCTCTGTCGCGAGCTGCTGAAAACTGGCTTAGGCTATTGCGAGTTAATCATCCTGATTACAATTACTTTATGTCTCATTATACACATATGAGATGA 1227 0.4564 MSATGGAAIAGGSRSRNRHLGENRFYSPPPLRKHREKQEQQQQQQRSSLSRTSSENRPGSSSDCSISSRATSDMSNLDRFLEYITPHVPAHYPPKTGSRRWKTRHPYFVLGDLWESFKEWSAYGAGVPLVLNGNESVTQYYNVSLSAIQLYIDPSKPSTRLRKSSQESDSESARETSSDSSSGYCHERGAKSVHGSRNHPNVLDASNHVLERVSLSNPFMGSLNDETESCNPPGQLIFEYFEHDTPYNREPLADKARCYPWVDLHIEIISDLARQFPELKTYWSCDLSPASWVSIAWYPIYRIPTGPTLQSLSACFLTFHSLSTALQSSNTDGLNIHYSRGRDMSSKLSLPIFGLACHKLKVSVWDPDGVSECQKANSLSRAAENWLRLLRVNHPDYNYFMSHYTHMR. 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00381 408 MobiDBLite consensus disorder prediction 160 174 - -
Seca12g00381 408 MobiDBLite consensus disorder prediction 156 198 - -
Seca12g00381 408 Pfam Protein of unknown function (DUF789) 75 400 IPR008507 -
Seca12g00381 408 PANTHER T15D22.8 28 404 - -
Seca12g00381 408 MobiDBLite consensus disorder prediction 1 70 - -
Seca12g00381 408 MobiDBLite consensus disorder prediction 42 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00381 Seca-Chr12 3340519 3345079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00381 - - gmx:100803393 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00381 12 3340519 3345079 Seca12g00381 12 3340519 3345079 ECH