Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05480 ATGGCTCAAATTTGTGTCCTTGAAGCAAGTGCGCAACTCAAATCGTGTCCTCAAAAGTTCTATCACTTCCTTAAGAGCCAAACTCAGCACATTCCAAATAAAGCTCACAGTCAAAACATGCATGCTGTTGAGATTCACAAAGGTGACTGGGAAACTCCTGGCTCTGTCAAGATTTGGAAGTTTACCTTAAAGGAAAATAAGAGACATTCAAGGAAAGGATTGAACTTGATGAAGTGA 237 0.4008 MAQICVLEASAQLKSCPQKFYHFLKSQTQHIPNKAHSQNMHAVEIHKGDWETPGSVKIWKFTLKENKRHSRKGLNLMK. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05480 78 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 68 - -
Seca10g05480 78 SUPERFAMILY Bet v1-like 7 63 - -
Seca10g05480 78 Pfam Pathogenesis-related protein Bet v 1 family 7 70 IPR000916 GO:0006952
Seca10g05480 78 Gene3D - 1 75 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05480 Seca-Chr10 124031185 124032772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05480 - - lja:Lj6g3v0779870.1 105.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05480 10 124031185 124032772 Seca10g05480 10 124031185 124032772 ECH