Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05467 ATGTTTTGCTTAGCTAAACCAATTGTTGCTAATGCCACCATTCCCCCAAACCCCGATTCTTCTTCTTCTTCTTCTCAACAACAAATCAATACTCCCAATCCCAATCGCAAACCACCTTCACTTGGCGCCACAAAACCTTTTCCCCGAAACAGGCTTCCCCGTCGACCTCCACAACCCTCTGTCATCCAAATCGAACGCGTTGTCGGTGCTGGAAGCTTCCGAGACGGCGAGCCCCAACCAAGTTTTTGTATAATGAGCAGAGATTCAGACATACGAAAGTCGGTGTTTGACTTGTTCCTAGGGCAAGCATTTGAAGGACCGGTGGAGAAGAAGCTCAGGCAAACAGGAGAGTGGCTTGTTGGCACTGCTGAGACCAGATTTCGTTCCTCTGGAAAAGGAATTCTAATGTTTGTGTTTCAATGGATGATACCAATTTGGATCATATTACTCCTAGTAGCTTCTGGAACTATCAGGTTGCCATTCAGCAACCCTTTTATTGATAATCTCCTCTTATGA 516 0.4574 MFCLAKPIVANATIPPNPDSSSSSSQQQINTPNPNRKPPSLGATKPFPRNRLPRRPPQPSVIQIERVVGAGSFRDGEPQPSFCIMSRDSDIRKSVFDLFLGQAFEGPVEKKLRQTGEWLVGTAETRFRSSGKGILMFVFQWMIPIWIILLLVASGTIRLPFSNPFIDNLLL. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05467 171 PANTHER NAD(P)H DEHYDROGENASE SUBUNIT CRR3, CHLOROPLASTIC-RELATED 3 170 IPR038931 GO:0009535|GO:0009773|GO:0010598
Seca10g05467 171 MobiDBLite consensus disorder prediction 14 38 - -
Seca10g05467 171 MobiDBLite consensus disorder prediction 9 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05467 Seca-Chr10 123833463 123838152 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05467 - - gmx:100810981 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05467 10 123833463 123838152 Seca10g05467 10 123833463 123838152 ECH